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11-1661-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663351 [Map]; Strand: w
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-1661-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CCACCACACT TCATCAAGTT CCGTAACACG 
    TGAGAGGCAC GTACGCTCGA ATAGCTCTTA TTCTTGATAT AACTCGAAGA 
    CGACGTCGTA GACGATACAC TTGGTCGACC CNGACTCCAC ATCGTTACCC 
    GACCCGTTCT CCGTCGAACC GTCTCTCTGG CCGGAGACTG TTTTCGGATC 
    TTGTTTCTTA AGAACGAAAC CTTCTTCGTT CGTGGTGGAT TCCTCCGTGA 
    CTGTCGACGT TGTTGCCGTC GATCTCTGTG AGCAGAAGAC CGGAGACTCT 
    TTTTGGATCT TCTCTGACGT TAGTTTCAAC TTCTGGAGTT TTTCTTCAGC 
    GTCTATTCCA CCGGNTNTTG TGACCCAAGC TACCANNCNG GGNNGGNGAC 
    CCNNNTGNNN NNNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663345 [Map]; Strand: w
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-1661-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGACACAAA CGACGCCGTA TTGGTGCCTT TGAATAAGTC TAGGTCTGGG 
    GCTTTTGGTC CGGCTTGGGA AGATGAACGC AGATACCAAT ACCACCAACA 
    GCACAATGCT CGGTACGCTC CAAAGTAGCC ATTACTCATA TTTTTATTCA 
    ATTAATCAAA TATTAAAATT AGTTACNTTT ATCACTGTTA ATGCTATATA 
    TGATTGGGAC TAATCTTATG CTATATCATA TAATATTAAT ATTATTATCT 
    TTATACGACT ATACCTTATA GTACTTGAAT T

AT1G05577.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR