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11-1696-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14975472 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1696-1 - 5-prime edge 
    GACTCGAGTC GATTCAATTT GAAATGAAAG GATAACTCAT TAGACACAGA 
    GACGAGCTTT TTAGTTTGAG CTCTCTCTCA CTATGTCTCT CTCGCAAACG 
    AATTTCCTCA GTTCTTCATT ACTCTCATCG AGCCATGACC TGCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14975547 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: -28; Region: promoter
    Flanking Genome Sequence: 11-1696-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GGTTATACAT TAATCGTTGA TTTTAATCCG GTTCGGCTGA TATGGTTTTC 
    GTTTTTGAAT TTGTCTTGTA TAATGAGAAC CGAAGTTTTC AATTTATTCG 
    GATGGTACTA CCCAAGTGCA TGCAACTTAC AATTTTGATC ACCTCTGAAC 
    CGTGTGACAA TAATCCCTTA CTAGAAGCT

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR