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11-1702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1932234 [Map]; Strand: w
      • AT3G06370.1 - [+] show detail - sodium hydrogen exchanger 4
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 11-1702-1 - 5-prime edge 
    GGGANAAACT AACAAAATCC GGTTATACGA TAACATCAGT GATGTTACAA 
    AACAAAACAA AAACAAAGCA AAAGGATTAT TAAAGAAAGG GTAAAATCAC 
    ATTTTTAACC ATCAGTAGAT ACGAATATAC CTTCCTATAT AGAGCTTCTT 
    GATAACAAAA GCACTGAGCA ATCCAGCCTA AAAGAAAACG AGTGAGAATT 
    TTTCGGGTTT AGAAATTTGA GGAGCGGAGA GAAAGAAACT TACTGCAACA 
    CCAAGTGCNT GTGCTTAAGA TAAAGAGGTA AAAAAAGTTT CCAGCAAACT 
    CCAAAGCTAT GGCTGAATTG ATATTTGTGA GGTCGAATCT CTGTATTGCA 
    TTGAAGAGCA CGACCGATGT GGCATCGTTC ACTACACCTT CTCCAAAGAC 
    AAGACTGTAC AAGAGAGGTG TCTCGTCTTG ATTAAGCACC TAGATTTAAC 
    AAAGCGTGCA AGTTAATTTT TGATTAGAAA ATGTAGTAGA ATAATATCTT 
    TGAATGTTTC AGAAAAAAAG TTCTTACTTG CAAGGTGCAA ACAGAGTCTG 
    TAGCAGAGAA TATTGCTCCA ATGGCTGCAA AATCATCAGT ACAGATTTAA 
    ACAGTATGAG ACTTAATGAA TAAGAACTTG AAAAGGGTTT TCTTTGTTTC 
    AGGGTACCTA GATAGTCCGC AATGGTAAGA TCACCGATAT TCATTTTCTC 
    GAAAAGATGT TTAGCACCTA GCCATAACAA AACAAAACCG GAAACATCAT 
    CAAATATATG AGACTCATGA TATTGA

AT3G06370.1

Model type
Protein coding
Short Description
sodium hydrogen exchanger 4
Curator Summary
member of Sodium proton exchanger family
Computational Description
sodium hydrogen exchanger 4 (NHX4); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: response to salt stress, sodium ion transport; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 5892 Blast hits to 5885 proteins in 1663 species: Archae - 61; Bacteria - 4002; Metazoa - 840; Fungi - 131; Plants - 419; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR