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11-1716-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1193799 [Map]; Strand: c
      • AT1G04420.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon8 (3UTR)
      • AT1G04425.1 - [+] show detail - other RNA
        Distance: -388; Region: promoter
    Flanking Genome Sequence: 11-1716-1 - 5-prime edge 
    ATTATAGATC AATAAAAGCG TTGAAACGTT TTGCAACTGT GGTACATTAC 
    ATGAGTACTG TAATATCTAT CATATCATAA GCAACTGTAA GAAACAAATT 
    CAAGCCTACA TATAACNTGT GTACNTTTCA CGGTGAGGTC ACAAACTCAT 
    GAGAAACCTT ATTTTCTTTC AAACGAAAGA AGGGTCTTTG AACCTTTTGA 
    AAACGGCGTC AATGTCTGCC ATAACTTCCT GCGAAAACGG CCGCTCCGTC 
    ATCAGAAAAG CATCAATGTC TTCTTTAAGT TGTTTTACCG ATGTGGCCCC 
    GATGATCGTG CTCGTCACAA AGGGCCTGTC ACGTACAAAC CCGAGTGCTA 
    ACTCAACCGG AGTTAAACCG TACTTCTTCG CCACCTCAAC GTATTGTATG 
    GTTGCTTCCT GAAATCAGAA CAAAGATAAA ATTGACCTCA AAACACTTTT 
    ACGAATAGGC TTTACAACTA AATTCGAGCT AATACGGTTT CTTAAATTGT 
    TTTACGACAT AAAAAGAAGT AAGCATAGTT GGATCAAGAA GAAACCTTGG 
    CTAGTGATCC CTTGTAACGT TCCATATATC CTGGGAAAAG ATTCAGCCTT 
    GCATTTTTTG TAGCCTTCTT GGTCTGTAGC CAAGTATTTC CCANACAACG 
    AGCCGCCTCC AAGAGGGGAA TAAGCAAGCA AGCCAACATT GCAATTTTTT 
    G

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1193917 [Map]; Strand: c
      • AT1G04425.1 - [+] show detail - other RNA
        Distance: -270; Region: promoter
    Flanking Genome Sequence: 11-1716-1 - 3-prime edge 
    TCTATAATGG ACCTTAAATC AAATCAAATT TATCCATTAA GCCTCATATC 
    GGACATGTCA ACAAATTTAA AAGAATTGGT GGGTTTGGGC CTATCTCGAC 
    AGCCCATCAA GAATACAACT TTAAGTAGTT TAAGTGTAAC ACNGTGTTGC 
    GGTCTTGCGG ACAAGGTAAC TGTGAGTTAG CCGTTGAGAT GTCAGAACGG 
    GAACGGTAAC TTAGAAACGG TAACTTACTT CAAAATTCAG AAACTATCCG 
    TTACTACTTT TTCTCAACGG TAAAGAAAGC T

AT1G04420.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04425.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR