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11-1725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24154454 [Map]; Strand: w
      • AT5G59990.2 - [+] show detail - CCT motif family protein
        Distance: -1370; Region: intergenic
      • AT5G60000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 4877; Region: intergenic
    Flanking Genome Sequence: 11-1725-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG GTAGCTATGT ATAACTCGTT 
    TGAGATATTC TCTCGATATG TTACCTAAAT CGATTTGATT CCAAACAAAA 
    AATTCTGGCT AATTAACCTG ACTAATCATG GATTGGAACA GATATACAAT 
    TCATATACAG AGCAGTACTA TCGTGTCTTG TCTGGTTAAT TATCCGGACC 
    GGACTAAACA CCCGTTTAAT GTGAACATAA CCAAAGCAAA TCAAGTATCT 
    GAGCTTAATT AATTATTACT GTTGATTAAG TTAATGATTA ATTAGGCAAA 
    AAAGTAGATT TGTATGCTGC TCACATGGGT TTGCGTGAAA TAATGCTTTT 
    AACCATCTTT TTGTCTCTCC TATACAAGTC GAGCTAAAAA GCTAAGTCGT 
    GTCCTTTATT TTATTTTATT TTTCTTTACA TTGTTGTTTT GCTGTTATGA 
    TTTATGAATG TTGCACGAGA TGTTATCTAT CTACTAGTAT TTTAAAACAC 
    AATTGTATTA TATTTTTCGT TTAAGGACTT GAAGTTAAAA CACAATTGCT 
    TACGAAAATA TCAGTAAATT TACTGTTTCA AGAAATGATC ATGCCTTCCA 
    TTTTACAACA ATTATCGTTG TGAAATTCTT AACACATTAA AAAATGTTAT 
    AACGCCATTT AGTTTGAAAC GTAAATGTGT TAAAGAGATT GAAAAAAAGA 
    AAGAGTTTAC TAATTATCCC ACATGTATTA TACTTTATTT CTCTGNATTT 
    ATAATNGATA ACATATTAAT CAGTAACCTA TATATAAGTA TGTAGATT

AT5G59990.2

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR