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11-1746-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3639863 [Map]; Strand: c
      • AT1G10910.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -15; Region: promoter
    Flanking Genome Sequence: 11-1746-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    CAGATGGATA CTTTCGTAGG CTCTGGCTCG GTTAGCTCGA AAAAACAATG 
    GAGACGCCAC TTCTTGTGGG ACTCGAACTA CGTTGTCCTC CTCATCTCTT 
    CAACACTCAC TCTCGTCCCT CTTCATCTCT CTCCATTCCC GCCTTATCCT 
    TACGAATCCT CACGCCGACG GCGGCAACGA CATCTTCCGC TGTTATTGAA 
    TTACCGGCGA ACGTAGCAGA AGCTCCTCGT TCCAAACGCC ATTCCAATTC 
    ATACCTGGCG AGAAAATCCG CCATTTCTGA AGTTCAACGC TCCTCGGATT 
    TTCTCTCTTC TCTGCAGAGG TCTTACTATC TATCACTTAT CACTTATCTT 
    CAAATTCTGT GATTCATTTT ACTTCAGTCA ACATTTCAAA AATTTGTCTT 
    TAAAAACGTA TTTTGTTCTT AACAGAAGTA AACAAAAATC TCTAGAATGC 
    TCAGTTCTGA AGTAGATGTA GTAGTGCCTG CTAATGGAAT TGGTCTATAC 
    TCTATAGAAT GTTAAATTGA TTCAAATTGG GGAAAGTTAA TTGACCACAT 
    CATTTCTAGA GATACATAAG AATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3639858 [Map]; Strand: c
      • AT1G10910.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -20; Region: promoter
    Flanking Genome Sequence: 11-1746-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT CTTTGAACAT GTTCCTGTTT CTTTTACCAA 
    AGTATCCCCG CGTTTTTAAT TGTAATCTAG TGCTAGTTTG AGAAGTGAAG 
    GGTAGTATAG TAAATTAGAA AAAAGTTCTA ATCCCAAATG GCCAAATCTC 
    ATCCTCAACA ACGCAAGGAC AAACGCCGTT TTATGATGGG CTTTTCGGGA 
    GAGACAAATG GGCTTTTAGG CAAACCATTA ATTTGAAAGG ATTATCTAAC 
    GGGCCATATT GTTAAAAAAA GTGCAACACC AAAGTTTGTA ATGTTGTCCA 
    TATCCAAATT GGTGACGAAA ATTCTGAGAG GAACAGTAAC AAAATCTTTG 
    ACAAACAAAA AAAGAGGTAC AGTAACAAAA TAGTTTTTCT GGACAAATAT 
    TCCCATGCGC ACGCACTTGT CACATCATGC ACTGTTCTTT GTGCGTCCTA 
    TGTATTGCTC CATGCACTTT CATACAAGAA AAATAATTTG TCATCACTGA 
    CATGTTTTTC AACAAAATGG CGTTTCTATT GAACCTAGTT TCTCTAAATT 
    ACATATGTAT TGTAGAAGAA AGAATT

AT1G10910.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 41177 Blast hits to 13618 proteins in 293 species: Archae - 1; Bacteria - 42; Metazoa - 324; Fungi - 460; Plants - 39061; Viruses - 0; Other Eukaryotes - 1289 (source: NCBI BLink).
Link
InterPro Scan - TAIR