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Mutant Lines
11-1758-1

11-1758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 5070236 [Map]; Strand: w
- AT2G12480.1 - [+] show detail - serine carboxypeptidase-like 43
  Distance: 0; Region: intron9 (CDS)
- AT2G12480.2 - [+] show detail - serine carboxypeptidase-like 43
  Distance: 0; Region: intron9 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTTT TACCTGNNGA TCCAAACCCG AGTTTGGTTC 
TGAATAATTC TCTTAAGACT CGGAAGCATG TCAATGTACC CGTCTATGCC 
ACTGTAGTTT AACCGGCTGT GACATAGTGA AAAGTGAAAA GCCAATATCA 
ATCAGTCAGC TTCATTTTTT GGTGATCAAC AAAATGAAAA GTGGGTCAAA 
CAACTTACTT GCTGCACATA NTCCATTCAT AAGGTAGGCG AGTGCGGTTA 
GCGTGAAGCG CATNCTGTCC CTCGGGGAGA TTGAAATAGA AACTTCTNTA 
ATATGTTATA CAAACATCAA CTACCATGCT AATCTTGGTA ACCTAAAACC 
ATTTTCACAA ATTTACACAA ATGTTTTTCT GTTGGAAAGA AAAAGGTGGA 
TAAGTGCTAA CCATTTTCTT GAGCCTTAGC TCTTGCTGAA CAATAGAAGG 
GTAACATACA TCGAGGAGAA TGTGATAGCT GTTGATATAC TCAGTGAGGA 
CGCTGGATTC AACGATTGCA TATATACAAG CATTGCTCAT GTTCTTTGGA 
TTGGCAAAGT CACATTGGTT CATGATTGTG AGTCTTACTT CATCAGAGAT 
CATCCCATGT GACCAGAAGT ACTCGTATGC AGCTGCAAAG TCCCTGTCAA 
GCT

3 prime edge [+] show sequence

Chromosome: 2; Position: 5070226 [Map]; Strand: w
- AT2G12480.1 - [+] show detail - serine carboxypeptidase-like 43
  Distance: 0; Region: intron9 (CDS)
- AT2G12480.2 - [+] show detail - serine carboxypeptidase-like 43
  Distance: 0; Region: intron9 (CDS)

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATGATTT 
CTATTAAAGA TCTTCTTTTC TTGTACTATG CAGCTTAACT CTCAGCTTGT 
TAAAATTGTA GTGGAGATCA AGATTCTGTA ATTCCACTTC AAAGTTCAAG 
AACACTCGTA CGAGAACTTG CTGAGGATCT CAACTACAAG ACCACTGTTC 
CCTATGGAGC TTGGTTCCAC AAAGAACAGG TAGTCTCCCT ACACCATCAA 
AACAATTCTA ACTAAGTTAA TTGTGATTGC TAACTTGTGG ATGTTGGGAT 
TGTGACTAAG GTTGGTGGCT GGGTCACAGA GTATGGGAAT CTACTGACCT 
TTGCAACGGT GAGAGGAGCG GCTCATATGG TGCCGTATGC GGAGCCCTCA 
CGAGCTCTGC ACATGTTCAG TAGCTTTGTG AATGGCCGGA GATTGCCCAA 
CAAACCAGAT TTAAAGTCTT CTACTGATGA TTGAAAGAGA AGATATCTCT 
TTGAGTAAGT TGAGATAGAA ACATATTAGG GTTTGTGTAA TAATGAACCG 
TGAACCCGAC GGAACTATTT TTATATACTG CCAAACATTG CGATGAGAAT 
ATAGTATTTC TCATAGATTA TTAGAGTGTG ATTGTATCAA TATTATTTGG 
TTACTTATAT GATTTCGATA AATGATGAAT CTTATCATTT TTCCGTTNGG 
ACGTTTCATA CCCTTATTAC ATATTAGACA TAGCTTTCTC TANATTATAT 
GATGATTTAT GAAATTGGGT TCATT

AT2G12480.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 43
Computational Description: serine carboxypeptidase-like 43 (SCPL43); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G12480.2

Model type: Protein coding
Short Description: serine carboxypeptidase-like 43
Computational Description: serine carboxypeptidase-like 43 (SCPL43); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR