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11-1763-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6713473 [Map]; Strand: w
      • AT3G19370.2 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon6 (CDS)
      • AT3G19370.3 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon6 (CDS)
      • AT3G19370.1 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-1763-1 - 5-prime edge 
    CCGAGAAAGA AGCAAGGATT AGGGTTCTTG AAAAAACTGT TGTTCAGGAG 
    GAAAAGAGTG AGCAGCAAGA AATGTCTTGC CTTGACTATG TGATGAAGAA 
    AACTAAACTA AAAGGGCTTT TTGTGTGTGT AATGAGTGAA CAGTGAAAAC 
    TGCTTTTGGG TATGTTTGAT GTGTCTACTC TATGAGATGT GATGAGTTTA 
    GACTCTTATT TGATCTAATA AACTAAAATA AAAGGAATGT GTTCAATCCA 
    CGTTAACCCG GAATGTGAAA AAACCAAACT GAGTTTTTTA AGTTGTTAAA 
    ATAATCTTCT TTGATAATCT AACTTATATC AAAACCTGAA AAAAAAATCA 
    ANATTTGCTT TTTCTTCTAG GATCTATAGC TAAANAAAAT TTGAATCAAC 
    ATTGTGAATG AAAAGTGCAG TTCATATAAN ATNGGACTTT ATTTTGATTA 
    CTTTTATGTT CTTTTTAGTA GTCTACACCT TCATAGTTCA TATACACACA 
    CTATCATATT TGAGTCCATA CTAACTACTT TATTGNGTNG CATATATTCA 
    GCCATGGCTA GGCCCAGTTT GNTTATTGNT CATTTGTTTG ACTATGTANC 
    CGATCAATGA TTTCTTGCAA GTTGCAACCA TTTAAAGTAC CTTTNGGGGT 
    CCNTTAAAAT ANANNCTAAT CGAAATNGTT AACAATTTGC TATNACACCT 
    TTTCACAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6713357 [Map]; Strand: w
      • AT3G19370.2 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon6 (CDS)
      • AT3G19370.3 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon6 (CDS)
      • AT3G19370.1 - [+] show detail - Plant protein of unknown function (DUF869)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-1763-1 - 3-prime edge 
    TTTCTCGGTA CCATCTCCAT CTTCTCACCT CTCGCCTTCA CTGGTTCGTA 
    CACGATCAAA GCGTTGTAAC GGTTACCATC ATCATCTTGA GCAACTCTGT 
    TAGTATCATC CTCTGCTATA TTTTCCCGGA GAGACGATCT TTTGTGTAGA 
    AATTTAATGG TGCTGCTTGT TTCTGTTGTA GATAACGCTC TTAGTTGCTT 
    CCGTAAACTG GTAATCGTTT CTTGACACTC TGATAACTTC ACAGAAGCTG 
    TTGCTATATC CCACCCCTGC AAACAAAAAC TCCATCATCA TCAACAAACA 
    CACATGACTC AAATTTTATA TTTTGGTTTG TAATACTTAC GTTTTTGTTT 
    CTCTGCGTCG GTTTCTTTGT TTCAACACTG CAAAAACGCA TAGATAAGTG 
    ATGAAATTTC TTTAAATAGA AGAAATGTGG AAAGCT

AT3G19370.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF869)
Computational Description
Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 44099 Blast hits to 25548 proteins in 1425 species: Archae - 637; Bacteria - 4297; Metazoa - 22352; Fungi - 3568; Plants - 2188; Viruses - 105; Other Eukaryotes - 10952 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G19370.2

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF869)
Computational Description
Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G19370.3

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF869)
Computational Description
Plant protein of unknown function (DUF869); LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT2G23360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR