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Mutant Lines
11-1769-1

11-1769-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 22278440 [Map]; Strand: w
- AT5G54840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: -17; Region: promoter
- AT5G54840.2 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: -17; Region: promoter

ACAAGCTCAC ATCTTCTTTT TGCCTTTCCT TTTATGTTTT TCTTTTGTTA 
CTGGCTAATT GGTAGTAATC GGTTTATATG GATTGGTAGT TGACCCGTCG 
TCTTAGAAAA TATCTATATT ACCCCTAGTT GATGCGTGTG TTCCTTTTGG 
TTTTTANTTT TAAGCTCTTC GCGTGTTGTT ATGGAAGGGT AATATAGTCA 
ATTTAGAACT AATTATCTTT CCATGAAGTA TAGTAAACCC AAAGTGTACG 
TGTCACTCAC TAGTTATATC ATTTGATTGT TCAGCTTTTG TTCTTTTGTC 
AACATTTGAT TATTCGTCTA AATTTAATCT TGATTGATAA CGTTCTCCTA 
CTGTTTGTTC TTATTTGAAT ATTATTTATT CGTGTTGTTT ATAAAAAAAT 
GATTATTATT CCTACAATGT ATTGTGATTT GATTATTCCT TAGTATTTCA 
ATATGAATTT GACTATGTAA TATATTATTC CTTAGTACTG AGAAATGAAT 
GATAATCAAA TATGTTATCA GTTGTTATAG TAACTCCATT TGAAACACAA 
AGCACGAGAA TCTTGAGAAG CGTTTTGTTG AAGGAAACAA TTTTGTTATT 
TTTGATATTT TCTTTTAAAA ATGAGCAACA AATAAAGTAG TTTATTAAAG 
AATGGTAAGT AAAGAAACAT TTGNGGTCNA

3 prime edge [+] show sequence

Chromosome: 5; Position: 22278324 [Map]; Strand: w
- AT5G54840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: exon1 (CDS)
- AT5G54840.2 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: 0; Region: exon1 (CDS)

NAGCTTGTGA ATGCCAAAAG ATCACATAAC TTTCTCTCTG TTTCATCAAT 
GGCCGAGAAA GTCCATGAGA TCGCCGGAAA GATAACTCCT TTCTGCCGGA 
AAATAGTTCA CTGTGAACAG AAAATGGAGA ATCATCTGAG AGGGTATCTG 
ATCTTTGGAG ATTTCTTTAG GTTTCTATGG AGAAAAATTG TTTCTTGTTC 
AAGTATCATC GAAAAACCTA TTCTTTACCG GCGAATCGTT CACAAGATTT 
CTTCCACCGC GGGCGATATC TTTGACGGAG ACGACGATAC TACGACAGAA 
CCTACTGTTT CCGGTAGAAG GTTTGGTTCA AGTTCGGATT CGGATTTGGT 
TAGTCTCAAG ATCAGTTTAT TAGGCGATTG TCAAACAGGG AAGACTACTT 
TTGTAGTAAG TATGGATTCT TGTGCTAAGT ATTAATTACT GTCTTGTTAT 
GTACCTTAAT TAACTGACTA ATCCTCATAT GTTTATTTTA TTTTATTTGA 
AGGTAAAATA TGTTGGAGAT GAGAATCAAA GTTTCTTGGA GATGACGGGT 
TTGAATTTGA TGGACAAAAC TTTTTATGTT CAAGGAGTTA CTATTTCGNT 
TAGCATTTGG GATGTGGGAN GTGAGTCAAA TTAACAANNT TAACTTANTN 
ATATGATGAT NTNNGGTTTN GGCANNTACA GGNCGGTNCT TTGGTCTTTN 
NAATTATTAA TTANGANATT NAAAAATNAT TGTTNGNACG GGANA

AT5G54840.1

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Curator Summary: Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.
Computational Description: SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G54840.2

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Curator Summary: Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.
Computational Description: SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR