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11-1782-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1596186 [Map]; Strand: c
      • AT1G05430.1 - [+] show detail - unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; B...
        Distance: -368; Region: promoter
      • AT1G05440.1 - [+] show detail - C-8 sterol isomerases
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-1782-1 - 5-prime edge 
    GTTGTAGTAG TACTCAATGA CTCAATGTAG TAAGAACACA CACACTTGGT 
    TCTTCGATTC GTTGTCTAGT TGTACAAGGG TAGGCACTCT CGGATGTACT 
    AGTTGTAAGT TCCTGTTTCA TTGTCATTTG CTTTGGTTCA CTGTGAGAAG 
    CCCAAACGCT TTCGTTTTGG TAAACCAATG GCCTTTTGTA ACCCAAAAAA 
    GATAGGTGTA ACTCAGTTCG GTTTGATTTA ATAAAATTTC GAGTTGGTTT 
    TCATTTTGGC TTGATTTGGT TACATTAACA CCGGTTATGA TTAGTATCGT 
    CGTATCGATT TCAATTTTAG TTCGGTTTAT ATTTTTCCAC ATTGGTTTTT 
    CGCCCTCTCC GGTTATAATG TCGAATTAAG TCAGATTCGA ACCGGTTCTT 
    CCCCATGATC GATTCGATTC GATGGAGTGA GGAGAGAGAA GGACTATAAG 
    TTTCCATGAG AAAGAAGAAG TAATCACACA CTTGTTCTTC GATTCGTTTC 
    TGGGAACTGA GAATATTTAA GAACACGATG GCTATGGCCG CTTTAAATCA 
    GCTTTTTGTT GTCCTAGCCT CAAAACCCGA GCAGGTAGAT ACTCTTTTAT 
    CTTTTCAATT AAACCCTANA CAATTCCANA AAAATCAACT CTTTTTCTAC 
    AATCAAGTTT TACCCAATCT ATGTATGATA CAGGTTTCAA ACTTNANCAA 
    GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1596302 [Map]; Strand: c
      • AT1G05430.1 - [+] show detail - unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; B...
        Distance: -484; Region: promoter
      • AT1G05440.1 - [+] show detail - C-8 sterol isomerases
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-1782-1 - 3-prime edge 
    ACTACAACTA GACAGTAACA ATAACAAGTA CTTGTTCATA ACTATACCTA 
    AAACAAGACA AGATGTCAAT GCTCTTAATA CGAAGGAACC ACATAGGGGA 
    ATATTTTTTT TTTNTNATAA GTTTNTAAGT NGGGGTCATN GCCCTANCCT 
    TNGACTNTGC TTNTNTNTNC AATCGTCGGG NGGATNAAAN CNTCCAATAN 
    CNCTCCCNAT TCANATTNTT NGCTACTCGG AACNCCAAGN GTTTNATGAT 
    NTCNATNGTT AGGGACANCA AACTTGANCT NTCNTCCNTC ACCGANCTTN 
    GGCTGTNCTC AAAAACCCNN GNGTTNGGAT NTANCTGCAA AACCGANGNG 
    CTCCNTTNGG TTTTCCCCCA GGAAGNGTNG GNCTCGNGTN TNGAGTANCC 
    NANTTTCCCC TNTGNCCACT TCANNGANAN TANCCAACCT TAAAANTCNT 
    TTAACCCCAN NTTTGTCANC AAANCANNAN CTNTGAAANG TCCTCNTNCT 
    CAAAGTTNTN NGGATAANCC AATNTTTNGC CNTNCAATTC CTATGTCANG 
    CTNTANATTT NCNCAANCAG ATCCTAAACA AGCANATNTT TGACTTTTGA 
    ATCCNCTNTN TTAAAACTGT AAGGCAGGGG AANAATAAAT TAAAATNGGT 
    TACCTCAGTT ACTCGGCCTG ATACNCGGGG ATCGAACTCA AGGAAAANCC 
    GGNTTGG

AT1G05430.1

Model type
Protein coding
Computational Description
unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05440.1

Model type
Protein coding
Short Description
C-8 sterol isomerases
Computational Description
C-8 sterol isomerases; FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: ergosterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ERG2/sigma1 receptor-like (InterPro:IPR006716); Has 118 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 4; Plants - 21; Viruses - 1; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR