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Mutant Lines
11-1789-1

11-1789-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 10807651 [Map]; Strand: w
- AT1G30510.2 - [+] show detail - root FNR 2
  Distance: 0; Region: intron4 (CDS)
- AT1G30510.1 - [+] show detail - root FNR 2
  Distance: 0; Region: intron4 (CDS)
- AT1G30510.3 - [+] show detail - root FNR 2
  Distance: 0; Region: intron4 (CDS)

CCCGTGGCTA TCATTATGTG TGTCGCGTTT GGATCACTCT CGGGTAATAG 
CATTACCTTC CCAGATGGAC CTGGTTTCGA AATGTATATT GAGTTAAAAA 
AAACTTAGTC CAAGGGGTCT TTAAGTATGA GATCAGTTGG TTGGGTAATT 
AGTTTACATA CCGGTGATTT GAATCTTGTC ACCGGGCTTT GAATCACATA 
GGAAATTGCT GCAGACTCCG TTCTTTGAAG GATCTTCTTT TCCAGTCTCG 
GGATCGTAAT AAACAGCTCT ACGTACACAT AAACTCGCTG TTTTACCGTC 
AAAGAAATCT CCGTACCTTG TTGATGCAAT TGAGTAAAGG CGCACATTGT 
GTGGCGCTCC CGGTTTCTTC GGGTTCTCAC CCTACACGCA CAAGGTCCAG 
TTCATTAATA GATTAAAGAG ATTAANAATG GTGGTAACAA TTTGAAGACA 
ACGTAACAGC ACGAGGGACA TGACTTACGG GAGGAATCAC ACCGTAACTC 
TGTCCTTCCC AGTAAGGAAG GTTACCATCA TGATCGATAA CAATATGACA 
AGTTTCTCCA GGGGCTTTCG GGCCAACGAC TCGCTCCACA NANACAATCT 
TANCGGNGTA CNACTCCTTG GGTTNNACAA NTTCAAAGGA GGATNTTTAG 
GGTCTTCNAC TNTNTNGGAN AAACANNANC CTTGAACNAC TNGTTNGNNG 
AACCNACTAC AAAN

3 prime edge [+] show sequence

Chromosome: 1; Position: 10807582 [Map]; Strand: w
- AT1G30510.2 - [+] show detail - root FNR 2
  Distance: 0; Region: exon5 (CDS)
- AT1G30510.1 - [+] show detail - root FNR 2
  Distance: 0; Region: exon5 (CDS)
- AT1G30510.3 - [+] show detail - root FNR 2
  Distance: 0; Region: exon5 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ACGGGAACAG GAGTGGCTCC ATACAGAGGC TACTTACGTC GAATGTTCAT 
GGAAAACGTC CCAAACAAGA CATTTAGCGG CTTAGCTTGG CTCTTCTTAG 
GCGTGGCCAA CACCGATAGC CTTCTCTATG ACGATGAGTT TACCAAGTAC 
TTAAAGGACC ACCCAGACAA CTTTAGGTTC GACAAGGCAT TGAGCAGAGA 
GGAGAAGAAC AAGAAAGGTG GAAAGATGTA TGTGCAGGAC AAGATTGAAG 
AATATAGTGA TGAGATCTTC AAGCT

AT1G30510.1

Model type: Protein coding
Short Description: root FNR 2
Curator Summary: Encodes a root-type ferredoxin:NADP(H) oxidoreductase.
Computational Description: root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 6645 Blast hits to 6645 proteins in 1680 species: Archae - 12; Bacteria - 3566; Metazoa - 779; Fungi - 733; Plants - 567; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G30510.2

Model type: Protein coding
Short Description: root FNR 2
Curator Summary: Encodes a root-type ferredoxin:NADP(H) oxidoreductase.
Computational Description: root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 6670 Blast hits to 6670 proteins in 1686 species: Archae - 12; Bacteria - 3590; Metazoa - 780; Fungi - 733; Plants - 567; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G30510.3

Model type: Protein coding
Short Description: root FNR 2
Curator Summary: Encodes a root-type ferredoxin:NADP(H) oxidoreductase.
Computational Description: root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR