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11-1807-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1373349 [Map]; Strand: w
      • AT4G03100.1 - [+] show detail - Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
        Distance: -932; Region: promoter
    Flanking Genome Sequence: 11-1807-1 - 5-prime edge 
    GGGANAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA TTGGATGAGA ATCCAAAGTT TTCCCGACTT 
    CATCCTTTGC CGTCAAACAT CGACTCCGGN GAAGATTCGA CGTCNACCAA 
    CAAACANNAC ATGAANNNNN ANGGGCNTTA NCACAAAGGC TCAGGNCATA 
    NTNNCGNTAG CGNGNTGCCA NNGTCCNCCN CAGCGACTTN CACCATATCA 
    GCCGNCAGTG GCGCCGGNAC TCCCGCCNGN GTGGCCATNC NCGNNANTTN 
    TTCCACCATN GTNTNGCGGT NCTCCACCGG GGGCTACAAG CNGANGGCGN 
    GACGCNNTTG GCGNCANGCG ACAGTGGAGA NGCCTTTNCT ACCGNTGCTG 
    NCCCTGGNGT AGNCATGGNA NCAANAGGCG ACANTGCCGA NCNAGNANNA 
    AACAAANANG ANGNGNGGGG GGGGGGGGAC CGGACNAGNT NGACCAANAA 
    NNACCACNGG CGCGGGGGGN NAGANAGGCN NNGANNNAGG NANGAGAAAN 
    AAGGGGTTNN NAAACGATCC NNGGNNCCGG GAAGNGGGAN AAGCGGAAGG 
    GAGCGNNAAG GGGNCNCGCG GGGGGGGNGG GGGNNAANNC CCCCGAANAA 
    NNTNNNTNCN TTTNT

AT4G03100.1

Model type
Protein coding
Short Description
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
Computational Description
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 3907 Blast hits to 3903 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 2865; Fungi - 460; Plants - 187; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink).
Link
InterPro Scan - TAIR