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11-1818-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17505903 [Map]; Strand: c
      • AT3G47500.1 - [+] show detail - cycling DOF factor 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1818-1 - 3-prime edge 
    GCTCCAGTCA TCTTCTTCGT CATCCTCCAC CGTAACTGCC GATTCAAAAA 
    CCGACGGAAA AGGGATTTTC ATACCGAAAA GCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17505787 [Map]; Strand: c
      • AT3G47500.1 - [+] show detail - cycling DOF factor 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1818-1 - 5-prime edge 
    ACTGGAGCGG CGGAGATGAC AAATCACCAG AGAAGGTACT GATTGATAAA 
    AAGTAATTTT GGCCTGAAAA TTGGAATTGT CCTAAATATA AATATGATTA 
    GATTAGTTTT GTACTAGTAA TTAACCTTAA CTAGTTACNT TCTTCAGTCT 
    CTGTTTTGTC TGTTTTGGAT CTACAATTTG TGTTATTGAG TTACATGAAC 
    GAAATTATAA CATAGTTCCA GTCTTGTGTT ACCATTAAGA TATTACTAGT 
    TCATTTAGTT GTTAGAGATT ATTGGTTCTG AACAATAATT GTTTGATTAA 
    GATTTCATAA AGAGAAACTT CTTTTATTCA TTGCAAGTGT TCTTAATTAA 
    TTGTTTCTTG TATCTCAGGT AACTCCAGAG TTATCAGATA AGAACAACAA 
    CAACTGTAAC GACAACAGTT TTAACAATTC GAAACCCGAA ACCTTGGACA 
    AAGAGGAAGC GACATCAACT GATCAGATAG AGAGTAGTGA CACGCCTGAG 
    GATAATCAGC AGACGACACC TGATGGTAAA ACCCTGAAGA AACCGACTAA 
    GATTCTGCCG TGTCCGAGAT GTAAAAGCAT GGAGACCAAG TTCTGTTATT 
    ACAACAACTA CAACATAAAC CAGCCTCGTC ATTTCTGCAA GGCTTGTCAN 
    AGATNTTGGA CTGCTNGGAG GGACTATGAN GAATGTTCCT GTGGGGGCAG 
    GACCGT

AT3G47500.1

Model type
Protein coding
Short Description
cycling DOF factor 3
Curator Summary
Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.
Computational Description
cycling DOF factor 3 (CDF3); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR