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11-1829-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 248674 [Map]; Strand: w
      • AT5G01660.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-1829-1 - 5-prime edge 
    TGGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCGGCCC NTTGATGTGA NATNACAAAA TCACGAAGAA 
    NTTCACATGA TGAAGTACCG ANACACAAAT GTATACAATT TTCAGTCAGC 
    CTAACTGAAC AAGGCCATAT AACTTAACAC ACAAAAACCC AACCAGGAGC 
    GAAATCAACA AACAGATAAT TCTGAAACAA AAGCGCAGAG CAGAGTTTCC 
    AAATCAGTAA ACAACGAAAT TCCAACCTTA CATCTCAACT CCTCGTGAAA 
    TCGAAACACG ATAAGAACCA TGCGATGACA AAACCCTAGG AAAATAAGCA 
    AAAGGCAACG ACTGAAACCT AAATGCTCAC TTAAACTGGA ATCGGAGCTT 
    GATCAACAGA GAAGTTGAGT GAGAGCGGTG AAAAATCGAA GAAGACGAGG 
    TCTCGGAGAG AAAGAGAGAG AGGGAGAAGA AGCT

AT5G01660.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink).
Link
InterPro Scan - TAIR