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Mutant Lines
11-1843-1

11-1843-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 24855289 [Map]; Strand: w
- AT1G66630.1 - [+] show detail - Protein with RING/U-box and TRAF-like domains
  Distance: 0; Region: exon2 (3UTR)

GANNNAANGA AGCAGGNCTT NTCANCGGNT ACTAAGCACT GCTGTGGAGN 
AAGGGAGCAG AATCNTNAAN TGAGGGGCTN TNTAGNAAAC NNACNAGNCC 
AGGGNCGATA ANANGANAGC GNGTTACNAN GAACANCAAC AACAAAAGAC 
AAACANGATT NAGTACATTA CTAGGCCACT GATGTATGAA CCTAATAACC 
TACTACAAGA GATATGANAT GATAATTACN CCTCTTNATC ATCATNATCA 
GCTTCTTATA CTTCTTCTCC TGATNGGCNA ATGCAAATTT GCATCTTCAA 
TATAGAGGCT TCATCAAGTA AATAGTAAGG AATCGACATG AAATTAGAGG 
CTTCACCACG TAAATAGTAA GGAATCGGCT TGTAATTCGC CACATGATTT 
TCAGCGCTTA CTTTTTGAAT NTTATTCATC TNCTTGGATT CAAACGTAAT 
CTTTTCACTT CCGTTCCGGT AGANGAGANG GCAAGAGAAT T

AT1G66630.1

Model type: Protein coding
Short Description: Protein with RING/U-box and TRAF-like domains
Computational Description: Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Zinc finger, SIAH-type (InterPro:IPR013010), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT1G66620.1); Has 1705 Blast hits to 1696 proteins in 709 species: Archae - 0; Bacteria - 0; Metazoa - 1145; Fungi - 28; Plants - 467; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link: InterPro Scan - TAIR