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11-1861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1176799 [Map]; Strand: w
      • AT1G04370.1 - [+] show detail - Ethylene-responsive element binding factor 14
        Distance: 1221; Region: intergenic
      • AT1G04380.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 122; Region: intergenic
    Flanking Genome Sequence: 11-1861-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    TTTCGTAATG ATTCAAGAAC AAGCAAAAAC GCACTCGTCG AAACAATTAC 
    ATACCTCGAC GAGACTCAGG GTCAACACGG TTCTCCGATT TGACCTATGA 
    CCTATCGGCG GCGGCGAGAA GGGGTTTCAG GTGATTAGAC TAGAAGGTTT 
    GACTGACGGT GGCTAACCGC CGGTGGGCCC AGAAGCTACG ACACCATTGA 
    AGCAATCAAA GAAAAGATTA GTGGGGACGA AAAGGGTTTC TGTGTTATAA 
    GCCGAGCCCA CATTATTTTA AGTTAAAAGT TANTGCAACT GAACCAAATT 
    TATTTATTCA TGTTTGNATG TNAACTATGN NNNGTTTTTA CTATATATTN 
    ATTAANTNGA ATTNTNATAG TNTNTAATNT TAAATNCAAG TNTTTNTTNA 
    TNGTNNNNNN NNCTNAGAAT GTGTNTTTTG TNGNTATGNN NGTNANNGGN 
    TTCTANGNGN NNNGAAAAAA AAANCNNTAN TNNNCCTNTT NNAGANNNNG 
    GNNNTAATAG NNTCCTATNG AGNATNCNTG TANTCNTNNN TAGNNNGCCN 
    GGNANNANGA GNCNTGANAN GGNNTTNNTN TNANCNTCTG TNCGTGNNNN 
    GNGCAGNNAC NNGAANNNNG AGTNTNTANT NNNTGANAAC TNNCCTGNGN 
    GNNCNNGAAG NNNNATNNAT GNNNNNNGGN NNNAAGNAGN TAGGNGNNNA 
    AAANTNNGCT NTNGNCNTTA TANNAATNTN NCGNAGNTNN NNGAATNCCN 
    ANATNNAGNT ANNCC

AT1G04370.1

Model type
Protein coding
Short Description
Ethylene-responsive element binding factor 14
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational Description
Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04380.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary
encodes a protein similar to a 2-oxoglutarate-dependent dioxygenase
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: 2-oxoglutarate-dependent dioxygenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G04350.1); Has 8121 Blast hits to 8082 proteins in 999 species: Archae - 0; Bacteria - 1115; Metazoa - 117; Fungi - 760; Plants - 4878; Viruses - 0; Other Eukaryotes - 1251 (source: NCBI BLink).
Link
InterPro Scan - TAIR