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11-1876-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15894 [Map]; Strand: w
      • AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1876-1 - 3-prime edge 
    TCGGTTCCTG TATATTTTAT TTGTTGAGAA ATGTCCAGTT CATATACATT 
    TAGAGGTTCC TCATGAGAAA GCCTTCGAAA GTGATTCCCG GTCCGAAAGC 
    TAAGCCCAGA CCCCACTCTT CTCCCTCTGT GCCTTTCTTC TCAAGCTCAT 
    CTCTGACTTT GTCCATTATG TAGAAGATGG TGTTGCTGCT TACGTTCCCA 
    TAATCCATCA ACGCCCTTCT GCTGCATTCC AGCTTTTCCG GCTTCAGCTT 
    CAGCTTTGTC TCCAGCCCGC TCAGGATGGC TGGTCCACCA GGATGAACTG 
    CCCAGAAAAG GTCATTCAAC TCCAACGCAC CAGAGCCAGC CTTTGCCACT 
    AGCTTCTTGC AGAACTCCTC CACGTTGTCT TCGATCTTCT GAGGGAGGTC 
    TCTTCCTAGC TTGAAGGTTA TGCCCTCTTC TGACAGCCGC CCGTCGATCA 
    CCCCCTGTGT TTGGGGCAGG AACTGCTGCA TAGCACAGTG AAGCTCCATG 
    AAAGGAGATT CCGACTCTGT AGGGTCTGCT CCGATGATCA GGGCAGCTGC 
    TCCATCTCCA AAGAGTGCAG CCCCGACTAA GTCNTAAGGA CGAGCTTTGT 
    TGGGTGGGGC GGAACCCCAN AACGGTAGTN CTCAGAAGGT GGNGAGCAAC 
    ACACGGCTTC CCTGGGTTGG TCTAAGCAAT GTNTTTGGGC CACGCGCGAN 
    CCCACTNNAA NCCTCCATAG CANTCCA

AT4G00040.1

Model type
Protein coding
Short Description
Chalcone and stilbene synthase family protein
Computational Description
Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link
InterPro Scan - TAIR