Home
Mutant Lines
11-1890-1

11-1890-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 591547 [Map]; Strand: c
- AT1G02720.1 - [+] show detail - galacturonosyltransferase 5
  Distance: -279; Region: promoter
- AT1G02720.2 - [+] show detail - galacturonosyltransferase 5
  Distance: -279; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
CGTCTAATAG GAATTCGAAT GTAAATACAC ATTGTACAAA ATCTTATGTA 
AGACTGATAA GTAACAGAAA ATAACTTGAA ATAGAATCAT CACCAGCCTC 
AAATGACGAC AATGAAATTT GCTCTTCACA ATACATAAAT TGATCATCTT 
TACTTTCACG TATCAACTTT TGCTTAAATA ATCCACATTT AATTATCAAA 
AAATATATAT TTAAAACACA CNTTTAAAAT AATTATATTC AACTACTATA 
AATACAAATG TTACACTCCC CTCTCTCTCT CACTTTTATC TGTAGATTTT 
TTTGCAGTAA AAAAAAGAAA AAACAGAAAC ATTTTTAACT ATTTATCTCT 
TCTTCTTCAT CTCCTTCGTC CTTGAAGCTT AAACTAGCGC ACTCCAGTAA 
AAGCAGAGGA GAAGAGAAGA GAGACGGCGC AGAGTAGCAT TGACATGCGA 
AATGTGCCTC TCANAATTCT TATCCTACGC CTGTTTCAAT TTCTTCTCCA 
CCATGAAAGT TTTCTGATTG CTCTTTCCTC ANAAATTTTG AAGCTTCGTA 
GTTTCTTCTG CATTCCTCGC AATGCATTGG ATTACGAGAT TCTCTGCTTT 
CTTCTCCGCC GCATTAGCCA TGATTCTCCT TTCTCCTTCG CTCCAATCCT 
TTTCTCCGGC GGCAGCTATC CGATCATCTC ACCCCTACGC CGACNAATTC 
AAACCCCNAC AAAACTCCGA TTACTCCNCC TTCAGAGAAT C

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 591542 [Map]; Strand: c
  - AT1G02720.1 - [+] show detail - galacturonosyltransferase 5
    Distance: -284; Region: promoter
  - AT1G02720.2 - [+] show detail - galacturonosyltransferase 5
    Distance: -284; Region: promoter
Flanking Genome Sequence: 11-1890-1 - 5-prime edge
```
GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTTAGATGT CACTTACATA AAAAAACTTG GTTAGGTATT 
GTGCTCTAAA AAAGATAACC ACGTTTAGAT TACTTTTTAT GGCGCATGTT 
TAAGCAGTTT AAATTTTAGG ATAGTGAGTA TATAATAACG AAAATGGATG 
ATAATATAGA AGAAGCTTCA CCGAAACGTC GA
```

AT1G02720.1

Model type: Protein coding
Short Description: galacturonosyltransferase 5
Curator Summary: Encodes a protein with putative galacturonosyltransferase activity.
Computational Description: galacturonosyltransferase 5 (GATL5); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT4G02130.3); Has 2014 Blast hits to 2000 proteins in 469 species: Archae - 0; Bacteria - 946; Metazoa - 269; Fungi - 2; Plants - 729; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02720.2

Model type: Protein coding
Short Description: galacturonosyltransferase 5
Curator Summary: Encodes a protein with putative galacturonosyltransferase activity.
Computational Description: galacturonosyltransferase 5 (GATL5); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT4G02130.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR