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11-1937-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 536198 [Map]; Strand: c
      • AT1G02540.1 - [+] show detail - unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae ...
        Distance: -499; Region: promoter
      • AT1G02550.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -285; Region: promoter
    Flanking Genome Sequence: 11-1937-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCNN TGCANAGTTT CAAGAAGTTG TCTTGTGTTA 
    TCTCCGTGGG CAGAAGAAAA AATTCAGAAT CGTGTCCTCA CACTCGAGTA 
    CTAATAGGGT TTTCCCATCT CTTGAAGACA TATACACTAT GGTAGATCCT 
    CGCGATCTCA AGTTCATTCC GACGGACTTG AAGTTGGTGG ATCATTATCT 
    ACGCAACAGA GTAGAAATGG ACCAAGATGG TTTCATAAAA GACATCAAAC 
    TACGAAGACG AACCGTGGCT TCTTCCGCAC GTCCACAATG ATCAGTTCAC 
    TGAGAAGGAA TGGTTCTACT TTGCCAAGAG AACAAGCGGA CCTTGTAAGA 
    AACCTCAACG TATGGTACCC GGACGAGGAG GCAGCGAAGG CGGGACTTGG 
    ACGACCACTG GCTTGAAAAA GGAGATCTTC AGTAACACCG TTGTGATAGG 
    ATATAAACAG GAAGTCTCGT ACTGCAAGCA TGTAAAAGGA CAGCCAAAGG 
    GAGAAGCCAC TGGTTGGTGT ATGACTGAGT ATTGGCTAGC GAGTGAGAAC 
    GATGCTGAAT T

AT1G02540.1

Model type
Protein coding
Computational Description
unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae - 18; Bacteria - 202; Metazoa - 802; Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes - 1751 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02550.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT2G47340.1); Has 183 Blast hits to 176 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 182; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR