1. Home
  2. Mutant Lines
  3. 11-1939-1

11-1939-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19284828 [Map]; Strand: c
      • AT1G51910.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon12 (CDS)
    Flanking Genome Sequence: 11-1939-1 - 5-prime edge 
    ANNNATGTGN NNGNTACNCA CNTTTGAACC GAATGAGCTG TANCAANCNA 
    GGCNNGNTNN NNCTNGGCCC NTTAAATNTT CCCCGGNGGA TGGTGAATCT 
    TATGTATCAA CANTCGTTGC CAGGAACACC CCGGTTACTT AGACCCTGAG 
    TGAGTAAATC AATCAATTAT CTTACTCATG ATAGAATATG AAATGTAATA 
    TTTTTAATAC TCTTTTCAGG TACTATAGAA CAAACTTGTT AAGCGAGAAG 
    ACTGATGTGT ACAGCTTTGG GGTAGTTTTA TTAGAAATCA TCACAAACCA 
    GCCTGTGATT GATACAACCC GCGAGAAAGC GCATATTACA GATTGGGTTG 
    GATTCAAGCT CATGGAAGGA GACATTAGGA ATATTATCGA CCCGAAACTA 
    ATGAAGGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19284914 [Map]; Strand: c
      • AT1G51910.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon12 (CDS)
    Flanking Genome Sequence: 11-1939-1 - 3-prime edge 
    ATTGAAAACG GNAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CGTCTACTTC CATTATGTAG ATACTCCAAT CCTGTTACAA ATTATTTTAT 
    GTCAATTTTT TATTCATCAA AAATCAGAAT ATAAGCAAGT CTTTTTGTTA 
    TTTCATCACC TTGTGCTGCC TCCATAGCTA TTTGGATTCT GTTTTCCCAA 
    CNTTAGAACA TGTCCACNTG CGGTTTCCTA TACCGAATTT CAATTGTTAT 
    AATTACGAAT T

AT1G51910.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 119905 Blast hits to 113754 proteins in 4176 species: Archae - 97; Bacteria - 12538; Metazoa - 41671; Fungi - 9653; Plants - 39014; Viruses - 350; Other Eukaryotes - 16582 (source: NCBI BLink).
Link
InterPro Scan - TAIR