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Mutant Lines
11-1941-1

11-1941-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 2710390 [Map]; Strand: c
- AT3G08900.1 - [+] show detail - reversibly glycosylated polypeptide 3
  Distance: -676; Region: promoter
- AT3G08910.1 - [+] show detail - DNAJ heat shock family protein
  Distance: 0; Region: exon3 (3UTR)

CCATCGAGGC TAACAACAGA GCAGAAATCT GGAATCAAAC GAATGTTTTC 
GTCTTCCTAG TCTGTCTCTT TCTTTCTTAC TGCTACCGTT TGATTTTCGG 
TTATGACTAG GTATGTGGTA GTGTGGGTCT TTGTTTGGGA GATTGTGAGG 
TTCTTGAACG ATGTCGCATT GAGATTTCTC AACGTCCTTC AGAGCTTTTG 
GTTTGGGTTT GGGGTTTTAC ATTTTAGCAT ATTTTTTTTT TTTNCGNCNT 
TTAAAATTNG TNNTNAAANG GGGGNAAAAA NAAAAACCNA ANAAAAAATN 
NTTNNCTTTT TNANTTGGTN AAAACCTTNA AANTTTTTNA AANCCNNCCA 
GGGAAAAAAN NNTTNGGGGC CNTTTCCCCN TTGGGCCCCN CCCCCGGNTT 
TTTTTTTNTT TNNAGTCNAN CAAAANNANT NCCAAAANTN TTTTNNAAAA 
AAAAANNNTT TNAAAAAANN TTTNNNNNTT TNGTTTAAAA AANTTTTTNA 
AAAANAAANA AGGGCCCCNN ANTTNGGNTT AAAAAAGGAA AACCGGGNAA 
AANCCGNAAN TTGGGGNGGG GNGAAAACCA NAAAAAAAAA AACNNNNTTN 
GGGNAAAAAN NACCNTTTTT TNTCCCGTAA NNGGAAAAAN NANNNTCCAA 
CCCCNNNCNN AAAAAACCCA AAAAGCCNCC CNGGTTATCN AAACANNNNC 
NTTTNNNTTG GT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 2710459 [Map]; Strand: c
  - AT3G08900.1 - [+] show detail - reversibly glycosylated polypeptide 3
    Distance: -745; Region: promoter
  - AT3G08910.1 - [+] show detail - DNAJ heat shock family protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 11-1941-1 - 3-prime edge
```
TTTAAAACGN CAGAGGTATT TTACNGACCG TTACCGACCG TTNCCNTCNC 
NATGGGAACT TAACAGTNAA CTTGATTCTC AAGTTCCCTT TCTTTGATGG 
GTCTTTAGGG ATTGGCATGC CTTCACCTTT CACCACCTCT TCATAAGAAG 
GGCTGATC
```

AT3G08900.1

Model type: Protein coding
Short Description: reversibly glycosylated polypeptide 3
Curator Summary: Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.
Computational Description: reversibly glycosylated polypeptide 3 (RGP3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: cellulose biosynthetic process, cellular cell wall organization; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, sepal, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 259 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G08910.1

Model type: Protein coding
Short Description: DNAJ heat shock family protein
Computational Description: DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink).
Link: InterPro Scan - TAIR