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11-1952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8563424 [Map]; Strand: c
      • AT4G14980.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1952-1 - 5-prime edge 
    GTCGAAATGG CATTGCCTAT CAGTGCACGG AGTGCGGCTA TCGGCTGCAC 
    AAAGACTGTA TCCAGGGCTT TCTCAGCTAT CCATCTCCGT GCGGTCACTC 
    TCTCAAGATC TCCATGCCCA ACAAATCACC TCAATATGCA AATGACCGAT 
    GCCATTTTTG TCTGTGCAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8850653 [Map]; Strand: w
      • AT4G15480.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -137; Region: promoter
    Flanking Genome Sequence: 11-1952-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGT 
    AAGATGTGTG GTCGAGAGAG AGTGAGCAAG TAGGTGTTGA ATAAATGCGT 
    TGACGCTTTA TATATATTAA GAACCTTTGT ATTTGAATAA ATGCGTTGAC 
    GCTTTATATA AATTAAGAAC CTTTGTATGT GAGAATATCA CAAACATACA 
    AATAATTCTT TACTTCACCA AAAGAAAAAA AAAANGGGAT CN

AT4G14980.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: shoot apex, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G54050.1); Has 1362 Blast hits to 671 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 11; Plants - 1277; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G15480.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Curator Summary
Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.
Computational Description
UGT84A1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7986 Blast hits to 7909 proteins in 477 species: Archae - 0; Bacteria - 354; Metazoa - 2305; Fungi - 71; Plants - 5077; Viruses - 110; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR