1. Home
  2. Mutant Lines
  3. 11-1957-1

11-1957-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • albino value (PATO:0000968)
    (Seedling::albino)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15574319 [Map]; Strand: w
      • AT4G32250.3 - [+] show detail - Protein kinase superfamily protein
        Distance: -996; Region: promoter
      • AT4G32260.1 - [+] show detail - ATPase, F0 complex, subunit B/B', bacterial/chloroplast
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1957-1 - 3-prime edge 
    GGCGGAGGCG ATGGAGAAAG CACAGCTCTT CGATTTCAAT CTCACGCTTC 
    CGATCATCGT TGTTGAGTTT CTCTTCTTGA TGTTCGCTCT CGACAAGGTC 
    TATTACTCTC CGCTTGGTAA CTTCATGGAT CAAAGAGACG CNTTCCATCA 
    AAGAGAAGCT CGCGAGTGTT AAGGACACTT CGACTGAAGT AAAGGAGCTC 
    GATGAGCAAG CCGCCGCCGT GATGAGAGCA GCTAGGGCTG AGATCGCCGC 
    CGCGCTTAAC AAGATGAAGA AGGAGACTCA GGTATAAAAG AAACAACAAT 
    GCACTCAGAG TGAAGAAATT GGTAAATGGA TTGTGTATTT TTTTTGCAGG 
    TTGAAGTCGA GGAGAAGCTA GCGGAGGGAA GGAAGAAGGT GGAGGAAGAG 
    CTAAAAGAAG CT

AT4G32250.3

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32260.1

Model type
Protein coding
Short Description
ATPase, F0 complex, subunit B/B', bacterial/chloroplast
Computational Description
ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink).
Link
InterPro Scan - TAIR