1. Home
  2. Mutant Lines
  3. 11-1963-1

11-1963-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7764584 [Map]; Strand: w
      • AT1G22030.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -4028; Region: intergenic
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -3340; Region: intergenic
    Flanking Genome Sequence: 11-1963-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA CTGGAAAGAG AGAGAGGTGG ACTAATTTGA 
    TTCTTTTGAA GGGTCAACTT GCCCCCACTT AAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7764588 [Map]; Strand: w
      • AT1G22030.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -4032; Region: intergenic
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -3336; Region: intergenic
    Flanking Genome Sequence: 11-1963-1 - 3-prime edge 
    TTGAANACNG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTTCCACCA TCCGATTAGA AATCACTGAA TCAAAGATTA AGCACACTTA 
    TCAATTGCTT ACCACCTTAA TTAAGTTTAA TCATAACTTC TCCTTCTGGG 
    TAGACAGGTA TATATCACAC GTAGTCATAG TCACGTGTCG ATCACTGCGT 
    TCATTTACAT AATTAAAAAA AAAAANGCTA AGNCAANAAT ATTNGTCATC 
    TTGATTTTTC NAAATATGTN TNGCNCAACN CATNTAATCA TATCAACTTT 
    ATTCAANGNC TTTTTTTGCA TGTNAANGTN CAAATAGNCA ACGGTNTTTT 
    ACATCAAAAT TCTNGATNTT CNACGTTNGA TTGGTTTNCA CTNTTTATAT 
    NAANAATNCC CTTTAATGCN NTAAACTTTT TAAAAAGGTA ATAACTAAGG 
    GCCNGGCTNG GATTAAANAN CTCNAAAAAT TCAAAANANC TTTNANNGAN 
    TTANNNANAA AANGGGCNGT TTNTGGNCCN TCCCCCAATT AATTNNNACA 
    NNCGAANCNT TCNTCTCCNT NCTAGCTNTT CTNTTATNAA GGAAAANTNA 
    ANCATTTGTN AAGANACNCT TGGNNAAAAA TNAAAAAACC TTTTTNGNAN 
    AGCTTGGGTT NAAANANAAA AAAANTTTTN NNGACCCAAA AAAAACCAAA 
    TNNGNCAAAA NANNCACAGG NNNANNNGTA CGCTNNNNNN TCCANNGTTT 
    NGACCNNGNG CCTTNCTTAA AATNNGGAAA AATGGGNNNG NAANAAAANA 
    ANNNNGGNGG

AT1G22030.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR