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11-1967-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7764559 [Map]; Strand: w
      • AT1G22030.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -4003; Region: intergenic
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -3365; Region: intergenic
    Flanking Genome Sequence: 11-1967-1 - 3-prime edge 
    NCCGTNCCNC CGTTTTATCC CTNTGCCACC NTCCGATTAG AAATCACTGA 
    NTCAANGATT AAGCCCACTN ATCAATTGCT TACCACCTTA ATTAAGTTTA 
    ATCATAACTT CTCCTTCTGG GTAGACAGGT ATATATCACA CCTAGCTCAT 
    AGTCACTGTC GATCACGTGC NGTTCATTTA CATAATTAAA AAAAAAAANG 
    CCCGGNCANT AATGTNTGNC CNNNNGATTT TNCAAAATAN ANTCTNGCNN 
    AACNCNTTTA NNCNTNTCAN CTCNATNCAA NGNNNTNTTT TNGCNNGNCA 
    ATGNNCAGAA AANCNANCNG GNTTTCACAT NANAATTNCC ACCCGGGGCC 
    NGNNGNCCCN CNCGGCCNCN NTAGGNNNNN NNNNCNCNNN NTNNGGNNNC 
    NCNNNNNNNC NTTGCNNNCA NNTANTNAAT NTGNTAANNN TNNNNANNAN 
    CNGATANCAG AAAATNTTNN GNANCNTCCG ATCNCCCGCG TTTNNNACAG 
    TNTNCANNGA NNGACNATAN CTTAGNGNNG NNNANNCCCA TNNNTANANA 
    TANATTNCAT NATNNGANCG NCNNNAAANC NCCGATNNNT ANNGNNCANC 
    NGGNNTTTGN NNGNNANNNN NNAANTATNN NNGNAGCNNN NANNANNTNN 
    GANTCCNNNG NNGTTNNTCG NGCGNANATN GGCANTAGCN TCANAGCG

AT1G22030.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR