1. Home
  2. Mutant Lines
  3. 11-1971-1

11-1971-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5556775 [Map]; Strand: w
      • AT5G16900.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-1971-1 - 3-prime edge 
    GTTTGAGGCA TATATCTCAA AATTTTAGTA AAAGTAATTG AGATATATAC 
    GTACGTACCA TCATCTGGAT TTGTTTCAGA GTGTGGAAAC TTGATTGCAG 
    TGAATGCCTC CATAGCATTA ACCAGAGGTA CACGTCGTGG CATAGACCTT 
    TGACTTTGTA CCAGCTGCAA ACTGCAGTTA CCGCCATCGC ATTTGTTCAC 
    CACAGTCTCT ACAGTACTTA CAGCCAAGTC TAAAGGAGTA ACACTCTCAT 
    TAGAAGTAAT CTTTTCATTT ACCATAAAGT AAAATTTCCT TGCAAGGAAT 
    T

AT5G16900.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, sperm cell, sepal, root; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G07560.1); Has 168111 Blast hits to 123484 proteins in 4541 species: Archae - 113; Bacteria - 13955; Metazoa - 44789; Fungi - 10304; Plants - 79478; Viruses - 406; Other Eukaryotes - 19066 (source: NCBI BLink).
Link
InterPro Scan - TAIR