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11-1979-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19742594 [Map]; Strand: w
      • AT3G53250.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -374; Region: promoter
    Flanking Genome Sequence: 11-1979-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GGCAATGCAT GTTCGTACAG TTTCAGTTTT 
    ATGAGGGGAA ATAACGGAAC CGCACGAGTG AAAAAAAAAT GGCAAACAAT 
    TCTCATAATT TAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19742591 [Map]; Strand: w
      • AT3G53250.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -377; Region: promoter
    Flanking Genome Sequence: 11-1979-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATGC 
    ATTATTACAA TTGCAAATAA GAAATGTTAT TTTCATCTTC TCGACTGTAA 
    CTGAAATCAT GGGAGCTAAG ACTTGTAAGA CCCCACAAAA GAAAGAATTG 
    AGAGATAGAG AGAAGATAAG GGAAATGAAG AAGAGTGATG GGTTTTAAAT 
    CTTCTTGGAC AAAGTGTGAT CTCGATTTAT GATTCATGGA TTTTATGATT 
    CTAAAATGTA CTCTCTTTTC TTTTGGTGAT TTCTTGAAGA TCAAGGCTTT 
    AGTTGAAGTG ACTTCTTGAA TTAGCCTAAT TTGTCTATAA AAATCCAATG 
    TTCATTTAAA AAAAAAAAAA NTNNNANCCT NNTTACCTNG NNAAAATNGN 
    TNNGNANCNT NNTNGNNNAA GGGNNNTTTN AANAAATTTT NNAAAANAAT 
    TTTTNTAAAN GGGNCNNCTT TTNNTTTNGT TTGGGNATTT TTNTTTNNCC 
    NNGGNTGNCA NGNGNANNCN GANAAAAAAN NGTCCCCTTT NNCGGGGCCC 
    NNTTTNNTGG GGANCCCCCC CAAANCAAAC CNNANCCCCT TTTNTTTGGG 
    NTTCAAATTC CCCCCCCCCN AAANNNNNTT TAAAAAAANN AANNTTTTTT 
    TTTTNCNCNT TNTTTNNCNA AAAACCCNNN GGNNGNNNNN TTTTTTNTTC 
    CCCNNNNGGG NNCNCNNGGN CCCNNNNNNA AA

AT3G53250.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G37030.1); Has 883 Blast hits to 881 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 882; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR