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11-1999-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17182472 [Map]; Strand: w
      • AT1G45545.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1999-1 - 3-prime edge 
    GTTTCGTGTC ACCGACAAGT CCTGTCTTGA TCGATACCGC TGCACCGTTT 
    GAATCGGTCA AGGAAGCGGT TTCTAAGTTT GGTGGAATCA CAGATTGGAA 
    AGCACATAAA ATCCAAACAA TAGAGGTACA AAAAGTGTTT TTTTCCTACA 
    TTTTCATTTC TTAGTCAGGC CGGTCTTGTT CTTAGTCTTG TGTTTTATAA 
    TTACCAGCCC NGNCCGNNGA CCNCGCATGC CNANCTTGAG AAGATACAAG 
    AAGATATGCC TGACTACAAG AAACAAGCAG TTGTAGCGGA AGAAGCAAAG 
    CATCAGGTGG TGATGGAGCT TGAGAGGACA AGGAATGTCG TCGAAGAGCT 
    AAAACTGGAG CTAGAAAAGG CTGAAAAAGA AGAGCAACAA GCGAAACAAG 
    ATTCTGATCT CGCGAAGCTG CGTGTGGAAG AAATGGAGCA AGGGATAGCT 
    GGTGAGGTAA GTGTTGCANC GAAATCGCAG CTCGAGGTGG CTAAAGCGAG 
    GCATTTGTCA NCGGTGTCTG AGCTGGAACC NTANGAGAAG ANATNNAANT 
    GGNGTCCANT GANTATGAAT CTCTTTTGAC GGANAAAGAT NTGGCTGNTA 
    AAAAAGCNNA NGACTCTGNT TTNAAAGCTA ANNATGTNNA NAAACANNNG 
    GANGGNTNGA CCTNTGGAGG TCNTTGCNNC CNAANCNNNN TTNGGANTNN 
    NNNTNNTGCC AANNANNNNG NNNCTCANGA AAANA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17182529 [Map]; Strand: w
      • AT1G45545.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1999-1 - 5-prime edge 
    GGGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCG GGGATCCAGA TGATCTCGGA TGCACAAAAG 
    CTCTTGGTGA GCCAGGAACT TTAAGACGTG AAAGACCAAG ATC

AT1G45545.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF827)
Computational Description
Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G42880.1); Has 129275 Blast hits to 70040 proteins in 3406 species: Archae - 1956; Bacteria - 28575; Metazoa - 54363; Fungi - 10498; Plants - 7741; Viruses - 526; Other Eukaryotes - 25616 (source: NCBI BLink).
Link
InterPro Scan - TAIR