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11-2000-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23406630 [Map]; Strand: c
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-2000-1 - 5-prime edge 
    GGAAAACNCA CAGCGCCNGA CGNANNNCCT TCCNCTCCGA ACGCGGATNA 
    CCANCCCGGG CCNNCNANGA CCACGTGCCC TAGATAGGAG GGCGTATATA 
    CANGACNACN CCGNNCNCNN ATNGTGAAAG GTATTNCTNG AACACGNNTN 
    NACTNAAAGA AANCATNTTT NTATTAAACG GNTNNCCTTT NTATTAAAAC 
    GTTTGGCTTA GCACAGNNTA AGGTTCTTTG AAACACTAAA ANNTGANGCN 
    CCTANGATAG ATNTAGAGCG CAGAAACNTG AGAAAAATAN AGTGGANAGN 
    GTGNAAAAGC AGGGAANAAN ANAAAGAGCC TTACNNNGGG NANNNNGGTN 
    ATTNACTGTG TGCGNNCNCG NACTCNAATG TGNNNTTNAT GGGCNGNGNG 
    GGTTTGNTGG GATNGTNGGN GGGNGNNAGN GNGGGNGGGA GGGANGGNGN 
    TGAGTTNNNN GTNGNNGNTT GNGTTTNTGG NGANGGTGNN NNNGATGANT 
    NTGTNNGNNN ANTNTTGTNN ANNNNTAGNT CTNCGTTCNG NATNATTNNG 
    TGNCNNCCNN NCGTNANAGN NGNAGAAAGG CNACANACNA CCNAGAAATN 
    TAANAANAGN AAGNAGTANN NNAANTGGTN TGTANNNTNT NNGTNANNGN 
    NNTNTNNNNN NTGNANANGG NNNGANGANN NGAGGGAGTC NAGAGAGCGN 
    NGNNGTNNGN GNGANNGNGG GTAGNGTNNA NTAAANAAAN TAAAGTAANA 
    ANANAAANAA AAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23406713 [Map]; Strand: c
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 11-2000-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    TGTAAGTAAA TAAACCAAAA TTACACTTTA CTATTCACCA ATGGCTACCC 
    CAAAGCTCAA ATTCACAATT CTTTTTCCTT TATTTTCCTA AGCCATCAAC 
    ATAACATTTT GAACCAATTT AGTAGTGTCG TGTTATGTTT CCATAGACGT 
    GAACNTGAAA AGCCAACTTG TTGCAGCAGT TTGAAAGAAC TTTGAAGCCA 
    GTGACCATAA CCTCGTGTTC CACGACTCTT TTGATCAGAA GCATCTCTTG 
    GTGGGGAACC ATCAAGGTTT CAGATTTGAC CCTTTTGATC GTTCAAGGGA 
    GCTGGAAGTT ATCTTATCAG ACGAGTCCCA CTCTGTGCTC CTGATCATCA 
    ATTATCCAGC CATCCGTAGA GAACTGCATC TGCTATGGTA GGCTTCTCAA 
    GGTTTCTTGA GAGATGGGCT TCTTGAACCC TTAAATAAGG ATCTTGGATT 
    CTTAAAGTAA CTGAGGAATG GTGTCTCAGA AACAGGTATG AATTTTGTGA 
    AAAAGCCGAT CGGCCATGAA AGGGATGCAA GTGCTATGCA AGTTCCCCAT 
    TGCCACCCGT TAAGCCTTAC TGTATCCGCA AACTTCTTTA GGAATT

AT3G63380.1

Model type
Protein coding
Short Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink).
Link
InterPro Scan - TAIR