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11-2020-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 247796 [Map]; Strand: c
      • AT4G00580.1 - [+] show detail - COP1-interacting protein-related
        Distance: -917; Region: promoter
    Flanking Genome Sequence: 11-2020-1 - 3-prime edge 
    NGCNCAGGNG ATNNACTAAT ACACTNTGAT GGCCGANCTT ANAACCTGTG 
    GACGTACATG AAATAGAACT NTGTATGACT TTGTTTGCCT TGTCTACTTT 
    CTTTGTACCT TAAACATTGA AGACATCTGT GACGTTATCT TCAACATCTC 
    CTCACTGTTT TGAATTTCTT AAACCTTGCA GCAATGCAGC TCAACAAGAA 
    CAATCTTTCG AACCCTGTCT TGATGTCTAC ACCACTGCAA AAAACCGCTC 
    AGGTAACTTG TAACTACAAA ACACACGTAG TTGTCAGTTT CTCAATTTCC 
    CACTTGAGCT TAAACCAGAA AACTAAACCG TTTTCTTTGC TTGTCTGAGG 
    CACCCATTGA TCCCGAGCTT CTCCCTGCAA CTTCATTTTA GCTCATGAAG 
    AGAAAACCAT AAACTTCACT TCACTTTAGA TCAATGATTC TACACCGGCA 
    TTACTTGGAG CTGTTTCTTC AATGATTCTA CACCAGGTAC TTGTCTTTTG 
    AAAATTTATG GTTCTTTGCT TGAGTGAATC TTAGATAGAC TTGCATCTCT 
    CTTGATCAAA TCCATCTGCT CCAACTCATT GNCCTATATA AAGCCCTTAG 
    CTAACTTCCT CGCCTTATAG CTTTGCTTTT CAACAATNCC TAGNANTTCC 
    TGGTNTCCTT AGAGAATCTC TGTNTTCATA TAACGTGAGG CCCACTTATT 
    TGGCCCATAA AGAAAGAAGT TATTA

AT4G00580.1

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT2G01800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR