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11-2037-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23564988 [Map]; Strand: w
      • AT1G63530.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-2037-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCNGG AAACANGTGC TNTCTCNACN ANACCATTNN 
    GNTGCNCAGC CTGNNGAGCN ANAGGTAGCT CCNCATGCTG CNGATCACTN 
    AACCTNNAAT GGTGCCACAA CTTNCNCCCN GGNNGANANT TNCTACCACT 
    AGNNGTGGNC CTATNATGNN NGNAACAACT CTTGCTGCTC AAGGCACAAC 
    TCCAGCACTT CAAACCTATC CTGTTCAAGG TTTCATTCTT CTCCCATTCG 
    CCGCCATGAG TCTGCAGTAA TTTCTTTACT CTCCAGCAGT TCAAGGCTAT 
    CTTGTCCAAG GTTTCATTCT TCTCCCATTC ACCGCCATGA ATCTGCACTT 
    CTGCAGTAAT TTCTTTACTT TCTGCATCAA ACTCTGTCTT CCAAATTGTA 
    GGACTAAGTC TTTGTCTTGA TTTAAGAAAA AAAAAAAAAA AAAATNGGGG 
    AAAATTNNAA ANGGNTTTNN AAAAAAAANA CNNGNCNGGG NAAAAAAAAN 
    TNGGGGTAAN ANNTNNNNCC TTNNANGGGC CNNNNAAAAA ANATTTTNNT 
    TTNAAAAAAA NAANNNAAAA NNCCCCCCNN TGNTNNNNCC CCNNNNNAAA 
    GGGGGNGTTN NGGGAANNAN AAACCGGGGG NGNAAACNNC CNNGCCCNTT 
    TAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23564970 [Map]; Strand: w
      • AT1G63530.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-2037-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACTCGAGCTT ACGGCAGGAT ATGTCGTCGA GAAAGATGAA AAAGCGCTCG 
    GAAACTGGGA ATCGAAACCA GTGAAAGGCG CATTAGGTTG ACCGAAACCG 
    GTAGATGAAA ATGTTGTAGC ACCACCAGCN NCNGCNGGGA AGAAACCAAA 
    AGCAGGACCA GTAAAGTTTC CTAGCGTTGT ACTAAAATT

AT1G63530.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G63540.1); Has 10212 Blast hits to 4024 proteins in 434 species: Archae - 1; Bacteria - 1259; Metazoa - 3608; Fungi - 2247; Plants - 291; Viruses - 90; Other Eukaryotes - 2716 (source: NCBI BLink).
Link
InterPro Scan - TAIR