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11-2044-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24408922 [Map]; Strand: c
      • AT5G60700.1 - [+] show detail - glycosyltransferase family protein 2
        Distance: -3974; Region: intergenic
      • AT5G60710.1 - [+] show detail - Zinc finger (C3HC4-type RING finger) family protein
        Distance: 1796; Region: intergenic
    Flanking Genome Sequence: 11-2044-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCNN GTACNGTNAT NTNCNAANAA ANANNCGNTN 
    GNAGNNATNN NNNGCGACNA NAAANCGAGG GNNGANNACN CATNANTGGA 
    NANCATCANT NNTGGNCCTA TTTACAAAGC TGANCACTTT TCTTAAAATC 
    TTACAAATTN GTCATTTATA AACAATGTTN ATCATTTGTT TTGCTAAAAT 
    ACATACNTTT ATAATAAATA TTAAACTCTA AGAACAAACA GAACCAACTA 
    AATCTAAATA TTACGGGTGA AATACATATT AAATCAAATT TTTATATCCA 
    GACTAAAATT ATAAGATATA AGATC

AT5G60700.1

Model type
Protein coding
Short Description
glycosyltransferase family protein 2
Computational Description
glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60710.1

Model type
Protein coding
Short Description
Zinc finger (C3HC4-type RING finger) family protein
Computational Description
Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G38970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR