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11-2066-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23262899 [Map]; Strand: c
      • AT3G62930.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: -972; Region: promoter
      • AT3G62940.3 - [+] show detail - Cysteine proteinases superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 11-2066-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    TCCGTACAAA TTGCTGCTAC ATTCTTGTTC TGTAATGAAA AACCTGGAAC 
    TGTGTAGCAA TAGATTATGC TTCGCCTTGT AACCAAATGA AAAATTGAAG 
    TTACACATTG GTTCTCTCAA ATCCAACAAA CATTAAAGAA GAAAGAATTT 
    CAGTAAACNT TTTGATACAA AAGCACTTTT CTTAAAGCT

AT3G62930.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Computational Description
Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G03020.1); Has 1393 Blast hits to 1390 proteins in 224 species: Archae - 0; Bacteria - 15; Metazoa - 320; Fungi - 249; Plants - 741; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62940.3

Model type
Protein coding
Short Description
Cysteine proteinases superfamily protein
Computational Description
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: SEC-C motif-containing protein / OTU-like cysteine protease family protein (TAIR:AT5G67170.1).
Link
InterPro Scan - TAIR