1. Home
  2. Mutant Lines
  3. 11-2074-1

11-2074-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10363275 [Map]; Strand: w
      • AT1G29650.1 - [+] show detail - transposable element gene
        Distance: 80; Region: intergenic
      • AT1G29660.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: -8564; Region: intergenic
    Flanking Genome Sequence: 11-2074-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTG 
    AAGCATAAGA AAATGTCATT CAAACACAGA GACAAAGATA GGAGCTGGAC 
    CAAAAAACCA AACCAATAAC AAGAAGAAGA GACCTAAAGA GAGATTCTCT 
    CACCCTCAAA AAACAGATGA AGCCAAACCG GATGACCAAC TGCAACATAA 
    GATTGAAGCC TTTGATCTTT GACAACGCTT TGAGCGATAA GAGAAGCCCT 
    CTTGTTTGAA GCCACCTTTT CCTCCACCAC CTTCCAAACT CCAATATTTT 
    CCAAAAAATG AGTTAGTTCT GAAACCTAAA AAGCAAAAGA AGGCCACGCT 
    TTCGGCCTAA CAAAAGCAGA CAACAAGTCT CCCGGTTCGA AAGCAAACAG 
    AACCTTCGAG AATCTGTGAC TGGCCATTCT CTCAATAGCC CAAAGAACAC 
    ATATAAAGAG ACTATCCTTT TTTGATGAAA GGTTACCAAA AGCCCTACGG 
    CTGTGTAACA GAACCTTGCC TTGCTCATCC CTAACAACCC ACGACCCTCC 
    ACAAAGCT

AT1G29650.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.5e-28 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR

AT1G29660.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 3857 Blast hits to 3814 proteins in 365 species: Archae - 0; Bacteria - 608; Metazoa - 0; Fungi - 87; Plants - 3137; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR