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11-2107-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9257274 [Map]; Strand: c
      • AT2G21640.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1649; Region: intergenic
      • AT2G21650.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -2309; Region: intergenic
    Flanking Genome Sequence: 11-2107-1 - 5-prime edge 
    CTTATCCCCA AATCTAGCAA GAAACAAAAA CTAAGTATTC TGATTCCTCT 
    CCTAGTGGTT GCTCTCCTTT TGCAACTTGG AAAAGAACCC GAACCTGAAG 
    TAATCACTCT ATAATGGAAG TTTCTGTAGC TCAAAATGTT TTCGAAGGAT 
    TTTCGAGGAT AGTGGTGAGA TATTATTATC AACAAAAGAA TGATCCCTTT 
    ACAAAATTGG ATTCGGACAA ACTTTACGCA AAAGAAGGAA ATGGCATATT 
    ATCACCAGGA ATCCATAAGA GCTAGTCCCA TTTGAGGGAA AAAAGTATCC 
    ACAGACACAA GCCTGGTCCA AAATCAGCCA TAGTAGCAGC CTATAACAGT 
    AGAGTTCTTT TTATTTTCTT GTTTCTCGGA ATCTTTGAAT AAAGAACTTA 
    GGAAATGGAG AATCTCCATG CTCAGGGGTT TTTATTGGTT GATGAGAGAA 
    TATATAAGGA AAAAGATCGT AATCATTTTC TTTTAAGAAT TGATCTTAAT 
    CTTCTTCTCA TCTGACATTG TTACCATAGA ACTGTTGTTT TTGTTCTTTT 
    TTTTAAGAGT GATTTTATCA GTAAACTGCC ACTGCTTTTG TTGATTTTTG 
    TCTAACATTT GTAGCAATCC AATACATAAA ACTGGTTTTC TGGAATAAGT 
    ATGTTGGTGG TCAACTAGCT CATAATAGCT TGGTCTCTAA AAAGATTGTT 
    TATTT

AT2G21640.1

Model type
Protein coding
Curator Summary
Encodes a protein of unknown function that is a marker for oxidative stress response.
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21650.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Curator Summary
RSM1 is a member of a small sub-family of single MYB transcription factors. Analysis of overexpressin lines indicate its involvement during early morphogenesis.
Computational Description
MATERNAL EFFECT EMBRYO ARREST 3 (MEE3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: RAD-like 1 (TAIR:AT4G39250.1); Has 548 Blast hits to 547 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR