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11-2109-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15650421 [Map]; Strand: c
      • AT2G37280.1 - [+] show detail - pleiotropic drug resistance 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2109-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CCAATATACA ATCATCGTTT CTTATTGATG GTGGTGATGA AGCAGAACAT 
    GCTCTGCAAT GGGCTGAGAT CCAGAGATTG CCAACTTTTA AACGGCTGAG 
    ATCGTCTCTG GTCGACAAAT ATGGTGAAGG TACTGGAGAA AGGGAAAAAG 
    GTTGTTGATG TCACCAAGCT

AT2G37280.1

Model type
Protein coding
Short Description
pleiotropic drug resistance 5
Computational Description
pleiotropic drug resistance 5 (PDR5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 9 (TAIR:AT3G53480.1); Has 443293 Blast hits to 292406 proteins in 4063 species: Archae - 8772; Bacteria - 359449; Metazoa - 10341; Fungi - 7279; Plants - 6493; Viruses - 4; Other Eukaryotes - 50955 (source: NCBI BLink).
Link
InterPro Scan - TAIR