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11-2111-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18271004 [Map]; Strand: c
      • AT4G39240.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -217; Region: promoter
    Flanking Genome Sequence: 11-2111-1 - 5-prime edge 
    GCGGGAAATT TGATGCTTGC GAAAAAGATA AAACTTATAA AATCGCACAT 
    TGAGGCCTTT ATCTAAATAT GGGCCTAAGC CCATTTGGGT GATTAAAGAT 
    AATAAAAGCG GGAAACNTGA GAAAGTATAA AAGATACCTT ATAAAAAGTA 
    CACATTAATA GAGAAATATG GGCCTAAGCC CATCAGGGTG ACTAAATTTT 
    AATTTAAAAT ATAAATATAA ATTTAAAAAC ATAATTGGGC TTTACTTCGA 
    TAAAAGTACT CAACCCATTT GTATGTCTGC GAGAAGACAT GATGATCGGT 
    TTTGTTCATT TGCAACTTTT GACTAAAAAA AGCAGCTCAT AGCAGCGGTT 
    ATGCCTTTTT CCGCCGCGAG TTCGAGCTCC GTAAGCTCAA TCGCTGAAGA 
    ACCGCCGCCA AAGAAACAGC ATGATCCATC GCCGTCCTGT TCATCGTATC 
    TGTTACTACT TCCAGACGAA ATCATTCTGA ATTGCTTAGC ACGCTTGCCG 
    AAATGTTACT ACCCGGTGAT TTCACTCGTC TCCAAGACCT TTAGGCGTCT 
    CATAGCTTCA CCGGAGATC

AT4G39240.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G14905.2); Has 1894 Blast hits to 1751 proteins in 120 species: Archae - 10; Bacteria - 133; Metazoa - 685; Fungi - 4; Plants - 1024; Viruses - 7; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR