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11-2130-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18356281 [Map]; Strand: w
      • AT3G49510.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2130-1 - 5-prime edge 
    CCAACACGGN NTNGGGGAGC ACTTTTTTGA CNGTGGATAC CGTNACTAAT 
    CAATGGTTTA CCCGGATCTT TTTTCAACTC TTNTATGAAC CTAGGAGCTT 
    CTTCATTGAT GAGGAGAAGA AAGTCGCTGT GTTTTTTTAT AATAAAGGGA 
    CCGAGACCGG TTGTTACCAA GTGGCTTACA TCATTGGAGA TTATGGATAC 
    TTCAAATCTG TCAAAATTGG AGTAATCTCG AACTCCCAGT GGCAACAAGG 
    CATACTTGTG TGCTCTTCTT ATGTTCCAAG TTTAGTGCAA CTACAAGATT 
    AGTCTCTTTT CAATACTGCA TTTGCTTTCA AGAAATAGTT GGTAGAAGTA 
    TGATAACTAA AGATCACTTT TTGCAGTTTA ATATTTGAAG TTTCATTTTT 
    AATTTTTTTT TNCTTTTTTT TAAAACATNT NGTTAANNAA AATNTTTNTN 
    TTTNNAAAAA ATNATNGATT NGTAATAAAN NAAGTNTTNN TTGGCCTNCC 
    GTTGTTTNCA ATNTACAGTN TTACTTANGT CCCATAGTTT ACACATGAAT 
    GGATGGGACT TTTGANTTAC NAN

AT3G49510.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G49520.1); Has 2110 Blast hits to 1239 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR