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11-2143-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10638463 [Map]; Strand: c
      • AT5G28635.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-2143-1 - 5-prime edge 
    CNGGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCANCN NNGGGTACAN TTCTGNNNAA GTTAGAGNAG 
    ATTTACACAG TGCTTTGTNC TAAATATNAC TACGAGATTT TTGATCTATN 
    CTATATATTT TTTTGTTTAA ATGTGTAACT TTATATATCA AACCAAAAGA 
    ATATTTACAA AAGAATAAAA AGACCTAGCA AAAAACCAGG TTTGTAAAGA 
    ATAAGAGTGT AAGAAAACAG AACAAAAACC ACGAGCAAAG AATAGTGGAC 
    GTATTTGGTT TTCCTGCAGC TATGGTCGGA CCATGAGTCA CCGTTGGAAT 
    AACAGACGCA AACGAGGGGT GGAGGAGTAG TCAAGTGATG AAATTCTGTT 
    GCGAATGAAT TTCTCGCCAT TCCGGATTAG TTGAGCCGAT GTAGTGGAGT 
    CGTTGCCATG GATC

AT5G28635.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.1e-162 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR