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11-2162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18811750 [Map]; Strand: c
      • AT5G46370.1 - [+] show detail - Ca2+ activated outward rectifying K+ channel 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-2162-1 - 3-prime edge 
    CCGCCGTTAC CGTCGTTAGC CATCTGGGTT TTCGCCGGGA AACTGGAAAG 
    TTGAGAGATT TTTGAAACTA GGGTCGTTTT CCGATAATGG TGGAGATAAA 
    GGAAGAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18811680 [Map]; Strand: c
      • AT5G46370.1 - [+] show detail - Ca2+ activated outward rectifying K+ channel 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2162-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTNAC GNNAATACGN TGATGANCCC AAGAATNAAC 
    CCACCACTCA CGCGCCGNGT GTTAACATTA CCGGGANAAC AATGACGNCN 
    CNACTTCCGA TGCCAATAAC TCCATTGGAA CTTAAAAACC GATTAATCTT 
    CGGTTCATTC GTTCGTTCTA GAAAAGAATC ATCTCTTCCC ATCGATGCTC 
    TCTCTCAAAA CCCTTCTACG TCATCCTCCG CCACAACCTC ATTCTCCGAT 
    TCCACAGACC TCCTTCTCCC ACTTACGGAG CCTAATAAAC CGGTTCGGAA 
    ATCTAAACCG ACCATCAATT TCCACCGGTC TAAAACAGCT CCTGCTATGG 
    CTGCAATCAA CAATATATCT CATCCCAATG ATCCCAAAAC AGATCAGCAA 
    TCTGATTCGA AAACTATTGT AAACCAAGCT GTTGCTTTAC TTGTTGTGTA 
    TCTATCCTTA GGTGTGCTTA TCTATTGGTT GAATCGAGAT AGCTACAATG 
    TGAAGCAGAC TCATCCTGTT GTTGATGCTT TGTACTTTTG TATTGTTACG 
    ATGTGTACGA TTGGGTATGG AGATATAACG CCGGATAGCG TGGTGACCAA 
    GCTGTTTTCG ATATTTTTTG TGCTTGTTGG GTTTGGTTTA TGGATATATT 
    GGCTTANTGG GATGGGTACT TATGTTCTGA TCTTAANAAA CTATNTGGTN 
    GGAAACTGGN AGGANGAAAG CTNCANCCCG

AT5G46370.1

Model type
Protein coding
Short Description
Ca2+ activated outward rectifying K+ channel 2
Curator Summary
Encodes AtTPK2 (KCO2), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK2 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.
Computational Description
Ca2+ activated outward rectifying K+ channel 2 (KCO2); FUNCTIONS IN: outward rectifier potassium channel activity, calcium ion binding; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 6 (TAIR:AT4G18160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR