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11-2172-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22850420 [Map]; Strand: c
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-2172-1 - 5-prime edge 
    GATAGAGAGA GAGAGAATGA AGACGAGATC TAGTGATGCC GAAGGAGATA 
    GTAGAGGGAA GATGATAGCT CCGGTGGGAG AAGGAAATGG TGGACGGAAG 
    AGAAAATTGG TGCAGAGCAA CCGAACAGAA GAACGATATT CAGAGAGAAG 
    AAGATGGTAG AGCTAAGAGA AGAATCGTTC AGAGCAGCGA CCAGAAGAAC 
    GGGAAGATCC TCAGAGGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22850534 [Map]; Strand: c
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: -59; Region: promoter
    Flanking Genome Sequence: 11-2172-1 - 3-prime edge 
    TGACTCTATC TCTCTTCTCA CTCAGTATCT CACTAGTCGC TAATTTGTTA 
    AGCGGAAAAT TGTTTCAGAA TTTGGTTTTT GCTCTGAACC GTGTAGCTGT 
    GATATATAGC CGCGAGGGAG ACACAGCGAA TTTGAAAATT TCGAATGTCA 
    AATGACNGTA TATACCCCTG TAACAAACTT TCTACCTCTG TAGATTTTAA 
    AATTTTTAAA ATACTTTTCA ATTTTAGTTA GAACCCGGTT TAGCACCAAC 
    AGACGTAGCA TTAACCGAGA GGGTCCCAGT GAGTGTGGTT TCCATGATTA 
    TGAAAAATCA AGATAGTATG GATTTTTTTT AATAGAAAAT TCAGAAACTG 
    TATTATGGAA AATGTTAAAA GCTATATTAA CACTTCAACA TTTTGGAACT 
    TTAGGTTGTT GGCTGTGAAG TTATTTTCTT AGAGTCGGTG AATT

AT3G61730.1

Model type
Protein coding
Short Description
reduced male fertility
Curator Summary
Encodes a nuclear localized F-box protein that is involved in tapetal layer degeneration and pollen development. Interacts with ASK1 and that interaction is mediated by the F-box domain.
Computational Description
REDUCED MALE FERTILITY (RMF); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36000.1); Has 49 Blast hits to 49 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR