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Mutant Lines
11-2175-1

11-2175-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 2994370 [Map]; Strand: c
  - AT1G09270.1 - [+] show detail - importin alpha isoform 4
    Distance: 0; Region: exon1 (5UTR)
  - AT1G09270.2 - [+] show detail - importin alpha isoform 4
    Distance: 0; Region: exon1 (5UTR)
  - AT1G09270.3 - [+] show detail - importin alpha isoform 4
    Distance: -44; Region: promoter
Flanking Genome Sequence: 11-2175-1 - 5-prime edge
```
TCCTTCTCTC TCGCTCTTTG GCAAAATTGA AATTGGAGAA ATTGGGATCG 
TGGAGGACGA GTCGTCTGGT GCTTTCGGGT TCGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 2994486 [Map]; Strand: c
- AT1G09270.1 - [+] show detail - importin alpha isoform 4
  Distance: 0; Region: exon1 (5UTR)
- AT1G09270.2 - [+] show detail - importin alpha isoform 4
  Distance: 0; Region: exon1 (5UTR)
- AT1G09270.3 - [+] show detail - importin alpha isoform 4
  Distance: 0; Region: exon1 (5UTR)

GAGAAGGAAG AAGATCCAGA CGAAGTGGTT TGCCTTCAGG GAACGAGAGA 
GAGAAAGAGA TTTTAACAAA CGATGTCGCT GAGGCCGAGC ACACGCGCGG 
AGCTAAGGAA GAAGATATAC AAGACAGGCG TCGATGCCGA TGAGGCCAGG 
CNGGAGGAGA GAGGACAATC TCGTCGAGAT TAGGAAAAAC AAGCGTGAGG 
ATAGTCTTCT CAAGAAGCGT CGTGAAGGAA TGATGCTTCA GCAGCAGCTG 
CCTCTCGGAG CTGGCCTTGA TGGTCCCCAG ACCGCTGCCG CCGTTGAGAA 
ACGAGTAAGT TCCCTTTGAT CTGAATTTCG ATACAATTGT GCGTGATTTT 
GTGATTTGGA TCACATGATT TGATTATTTA GTGATGGATC TTTGTTTGAT 
TGTTGAAAAA AGTGAGGCTT TGATTCTGTT TCCTACCTCA ATTCTAGATC 
TCAGCTCCCA ATCTCATAAT TGACCATCAA AGTTTAGTTT TTTGTTTTTG 
GGAATTTGTT TATGGATATT TGGGATTGAT AGCGGATC

AT1G09270.1

Model type: Protein coding
Short Description: importin alpha isoform 4
Curator Summary: Protein interacts with Agrobacterium proteins VirD2 and VirE2.
Computational Description: importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4272 Blast hits to 3104 proteins in 282 species: Archae - 2; Bacteria - 6; Metazoa - 1653; Fungi - 615; Plants - 1226; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09270.2

Model type: Protein coding
Short Description: importin alpha isoform 4
Curator Summary: Protein interacts with Agrobacterium proteins VirD2 and VirE2.
Computational Description: importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4272 Blast hits to 3104 proteins in 282 species: Archae - 2; Bacteria - 6; Metazoa - 1653; Fungi - 615; Plants - 1226; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09270.3

Model type: Protein coding
Short Description: importin alpha isoform 4
Curator Summary: Protein interacts with Agrobacterium proteins VirD2 and VirE2.
Computational Description: importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR