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11-2188-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6796034 [Map]; Strand: c
      • AT1G19640.1 - [+] show detail - jasmonic acid carboxyl methyltransferase
        Distance: -4188; Region: intergenic
      • AT1G19650.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
        Distance: 168; Region: intergenic
    Flanking Genome Sequence: 11-2188-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTATGTTTA TACGACCAAA CAAAGGACTC GTCACAAGTT 
    CCAAGTACAG TTTGTTCTCC CTTTTACCTG TCCAATGATA CAATCTTCTC 
    TAAAAATGAG GATTCATGTA CTACAATGCC ACAAAATATC GCNTTTCTTT 
    TTTACTATAT GAGTTGCAAA CTTTGAATTA GGCTCAACTA ACTAGTGAAA 
    TAATGTGAAT CGAATCTTCA AATAGTACAA TAGGATTTGA CAAAACAATA 
    TTTAGCAATT AGGTCATCAT GATGAGTCTC TATCACTTAT TTATTTGGTT 
    TAAACCACTC TATCAAATTT AAACCGGACT TAAAGAATAT GATAGCGACT 
    GTCTTTTTCA ACCACAATAA AAATATGTAG AAGGGTTTTA AAGAGAACAC 
    ATTTGTATCC ACAAAATTTT CAAATCAAAA ATGTTTTATT TTATGCAAGT 
    AATTTGGTTC GCGATTAAGA GGTTTTGTAC TATAATGGTT TTAAAGAGAA 
    CACATTTGTA TCCACAAAAT TTTCAAATCA AAAATGTTTT ATTTTATGCA 
    AGTAATTTGG TTCGCGATTA AGAGGTTTTG TACTATAATG GTTTTAAAGA 
    GAACACATTT GTATCCACAA AATTTTCAAA TCAAAAATGT TTTATTTTAT 
    GCAAGTAATT TGGGTTCGCG ATTAAAAGGT TTGTACTATA ATGGGTTTAA 
    AGANACACAT TTGNNTCTAC AAATTTCAAA N

AT1G19640.1

Model type
Protein coding
Short Description
jasmonic acid carboxyl methyltransferase
Curator Summary
Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment.
Computational Description
jasmonic acid carboxyl methyltransferase (JMT); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 890 Blast hits to 871 proteins in 121 species: Archae - 0; Bacteria - 61; Metazoa - 9; Fungi - 5; Plants - 740; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G19650.1

Model type
Protein coding
Short Description
Sec14p-like phosphatidylinositol transfer family protein
Computational Description
Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75370.1); Has 2627 Blast hits to 2615 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 801; Fungi - 541; Plants - 877; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).
Link
InterPro Scan - TAIR