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11-2192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16161586 [Map]; Strand: c
      • AT4G33650.2 - [+] show detail - dynamin-related protein 3A
        Distance: 0; Region: exon2 (CDS)
      • AT4G33650.1 - [+] show detail - dynamin-related protein 3A
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-2192-1 - 5-prime edge 
    TTCAATACAT TAGGNGAAGA AATTTTAAGA CGAATCTGTG TATCTGCTAC 
    ACCTTTGNTC TCTCCAACTA ATCTATTCGT CTCAGCCTAC AAAGATGTTG 
    CATTTCATAC ATTAATACAA ACTTGGAAGA GCAATAGAGT ATCAAATAAA 
    GCAAGGAAGG GAATAAAAAA CCTCAATTTC TCGACGAATC TCAGAGAAAT 
    CATAGAAACG AGTTTCAGGA AGGTGACGAA ACTCCCCCCA CTCATCATCG 
    GATC

AT4G33650.1

Model type
Protein coding
Short Description
dynamin-related protein 3A
Curator Summary
Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.
Computational Description
dynamin-related protein 3A (DRP3A); FUNCTIONS IN: phosphoinositide binding, GTP binding, GTPase activity; INVOLVED IN: post-embryonic development, chloroplast organization, peroxisome fission, mitochondrial fission; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G33650.2

Model type
Protein coding
Short Description
dynamin-related protein 3A
Curator Summary
Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.
Computational Description
dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1).
Link
InterPro Scan - TAIR