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11-2206-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 158319 [Map]; Strand: w
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: -137; Region: promoter
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: -137; Region: promoter
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: -137; Region: promoter
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: -137; Region: promoter
      • AT2G01330.1 - [+] show detail - nucleotide binding
        Distance: 0; Region: exon6 (3UTR)
      • AT2G01330.2 - [+] show detail - nucleotide binding
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 11-2206-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTGAGTNT 
    CTCTTATCAT GAAATGCACA CGTGTCTAAA TCTATATGGT CAAATTTACT 
    CTGTTGTGCT GATTAGTGCC GAGTCAAAGA TTAATTAAGT ATTGAGGGAA 
    AATTTAAACA AAGGTTAAAT AATTAGAAGA AGAGATAATG TTTGGAGCCT 
    TGGTTGGTTC TTACTTGTTA CTTTGCTTCG TACGGATTTG AAGGCTTTAC 
    CTCACCGGAG CTTCCAAGTA GAAGACGACA CTGAGTCACT GACACAGGGA 
    TACAAATTAT GGCGCCTTTT GGCGGGAAAT CTTTAGCGGA CGTTGTTTCT 
    GGCATCGGAG GGAATGGTGT TGGCGGGGCT CTGGCTGCGG TGGCCGCCGC 
    TCTGTTGGTC CGCCTCTTCG CTGGACCTGG CATCGCTCTC TTACCTGAAG 
    ACGAAGCTGA AGATGATTAC GCTGAGACGG AAGACGGTGG TGGTGATTCA 
    ATTCGTCCGG TGACAATCCG TTGGAGGAAC ATCACCTGCT CGCTCTCCGA 
    TAAGTCCTCC AAATCGGTGA GCACATTTCT TCTCCTTTTG CATGTTTCGA 
    TTGCGCGTAT ATTAGTCTTT CCAATTTCAC GTTAATAGCC GAATCAGAAT 
    TGGTTGATTA TGTGATTCTC AGGTGAGGTT TTTGTTGAAA AATGTATCCG 
    GAGAAGCAAA NCTGGGAGGT TGCTAGCGAT TTGGGTCCTT NTGGTTCTGG 
    GAAAACAACA TTGCTCANTG TTTTANCAGG ACAACTTAGT TTATCNCCAC 
    GTTTGC

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01330.1

Model type
Protein coding
Short Description
nucleotide binding
Computational Description
nucleotide binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01330.2

Model type
Protein coding
Short Description
nucleotide binding
Computational Description
nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link
InterPro Scan - TAIR