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11-2221-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27209641 [Map]; Strand: c
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-2221-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC GCGGTTTTTA AGTACATTTT CTTGTTTTGT 
    TTCAATGAGA CGAATACTTT GTCCAAAGAA TAGCAAAAAT GAAAGGAATA 
    ATTAAAGTGT ATTGTGATTT GGACTTCACA GTTCACATGG CCCAATCACA 
    AAAGGTTTCA GGCTCGGCCC ATTGTGAGAG CACTCGGTTA ATGTCAAACC 
    GGTTGGAGGC AAAATAAATT GAATGGCATA CATATATGAC CTACTACGTT 
    CAGCTCTGAC ACGACACAAG TACCCGACTT CTTGTCCTAG AGGAAGCTCT 
    TTTTAATGGT GGAATCAACA TCAGACTTGG AAGATCAAGG TACGAATTAA 
    GATGTTTAGA AGATTTCTGT TTGTTTTTTC CTACCGAGAA GAAAAACCGT 
    TATTTGGTGG AATCTCTGGG TCAATTATTA TCTTTTCTAG CTGATGACTG 
    AGCTTGATTA TTCCTTTAGT ATATTTGCTC TTGTTTGTGT GGGTAGTTTT 
    AATCCTCAAC GTGACAGTGT GGGCTGGATT GAATAATTTG TCTGCTGTGT 
    TTCTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27209692 [Map]; Strand: c
      • AT1G72270.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR0...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-2221-1 - 3-prime edge 
    CGCGTAAGTC AAATTCATGA TCAAAATCCA AAGCAAAAGA TTGAGAATAG 
    AAGAGAGTAA TCCAATACCT GAAGTGAACA GCTACAAAAA ATTATACGTT 
    CATATTAAAT TATCTGGTTC ACATTCTAAG CCGTAAACNT GCATACNTGA 
    AACAGATGTA CATTGTACAC ACAAAAGAAA ACAGCAGAAA CCACAATTTA 
    CAAGATAAGG CTAAAACAAA CAAACAAAAA CGCNTTCTTG CAACTTTTCG 
    ATTTCATCTT AGTGAACTCA CTCGGCTTAG GTTCTCAGCG ATAGCGTCTC 
    TGATCCTCTT CGACTCTCTA TATGCTTCTC CTTCGAAACT CCGAGTCTCC 
    TCCTCCTTAT CATCATCTTT TCTCATCTCA CCATTATCAC CAGCTTCACA 
    ACCATTCACA CATTCCTCCA CTGAATCATC ATCATCACCA GAATT

AT1G72270.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR