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11-2230-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6889116 [Map]; Strand: w
      • AT4G11320.1 - [+] show detail - Papain family cysteine protease
        Distance: 57; Region: intergenic
      • AT4G11330.1 - [+] show detail - MAP kinase 5
        Distance: -2939; Region: intergenic
    Flanking Genome Sequence: 11-2230-1 - 3-prime edge 
    ATGAAAACGG NAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTTTATAA TCACTGGATT TAAAGTGTAG TTGGGAACTA TCATTCCCCA 
    AATTCAGAAT CACTCATCAA TCTCGTCTCA CACAAGTACC TTTTTCGCAA 
    AAGGGAAAAT ATTTATCACT AGACCCAAAG AAATATTATA CAAAGTTCAA 
    ACATTGACTG ACCCCCATAC AAATGCATAA TATATAACAA AACCAAACCA 
    ATCGACCACA TTATTTTTTA GTTTCCTTCA AAGTCGAATA ACGATAATGG 
    CTTAACCGAT CCGTTCCATG GCATACATTT AGTTCATATT ATTAGGCAAC 
    CGAAACTTTA TCCGTAGAAA ACGAGTTCTT GAGAGGGTAT GAAGCTCGCA 
    TTGCGATGCC ACATAGGCCT CTTGGATCGG CAATTTTGCG AGCCATCTTC 
    ATGTACCCAG CCTCCCCCCA TGTGTCGCCC CTCGAGTTTT TCACAATCCA 
    GTAGTCACGA CCATTCTCAG TTCCATACCC GACCACAACA NCNCCATGGT 
    TTATGTTTGT TCCGNAAGTT CCATCAAACA CCTCCCTTTG ACAAAAATNA 
    AATANAAATN ATAATCNATT GAATTTTTTT CTTCAACTAA AGAACGTTTT 
    CTAACNAAAA TCTACANAAT GAATTTTGTT ACCGATTCAT AAAGCNGAAA 
    CTNTCTGCTN GCTGNAATCN ANAANGGCAG TCACANGCTG GTGAGCANCC 
    GNTNNATGAA ACCGGCTCCN TTNTTNGGAG GCNAATNCTN NTCCCNNGAN 
    TGGTAACTT

AT4G11320.1

Model type
Protein coding
Short Description
Papain family cysteine protease
Computational Description
Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G11310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G11330.1

Model type
Protein coding
Short Description
MAP kinase 5
Curator Summary
MAP kinase
Computational Description
MAP kinase 5 (MPK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 126445 Blast hits to 124887 proteins in 4831 species: Archae - 118; Bacteria - 13666; Metazoa - 48018; Fungi - 12607; Plants - 30504; Viruses - 585; Other Eukaryotes - 20947 (source: NCBI BLink).
Link
InterPro Scan - TAIR