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11-2231-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1480743 [Map]; Strand: c
      • AT1G05136.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1680; Region: intergenic
      • AT1G05140.1 - [+] show detail - Peptidase M50 family protein
        Distance: -1805; Region: intergenic
    Flanking Genome Sequence: 11-2231-1 - 5-prime edge 
    GTCANAGAGC AATGATCCTT ATGCCTTCTC AGGCGACTCA TCATCACTTC 
    ATCATCCATC GTATGTCTCT CTAATCTTTA TCATACTCGC ACATATGTTT 
    TAAACCGCAA ATATACAATC AAATTATTCG TACATATGTA TACAATACAT 
    GAGCATGTTA TCAAATGATT CGTACATGTG CATGTATACA TGATCATGTG 
    TGTGTGCTTG GAATCATTAC GATTTTTATT GACTATACAC ATTGTCAGGA 
    TCAAAGGTCG AAGAAGAAGT GAAGATATAT CAACTGATTA TATGTTTGGA 
    GATGATTAAT AAGAATCATA GAAAATGATC AGCGATATGG AGTAATCCTA 
    TAACAACTGG TTCGAGTTTG ATCGAATCGA TATTTCTTTT CTTTCGATTG 
    CTTCGAATAA AAAGTTGGAT CATGGTTTGA GGCAAGTAAA AGATCACCAG 
    TTCCCCCTTT CACAACTTCA ATCTCTTTTG TCAAGGATTA TATTATTACA 
    TACTCTATGT TNTAATTTTC AACCAAATTC AGGTTCTTAT TTTGTCAGAT 
    TATATGAACC TAATATTTCA ATTCTATAAT CGGNTATTNT TGGATGACCA 
    TTACGTGGTA TAAAATCTCT TTAGCCTAGT ATTCACTGAT ACTCGAATTA 
    AAAATTCCGT ATGTATCAAA CAACATATTA TTGCTCCATT GAAGNGGATG 
    AATANGGCAC CNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1480859 [Map]; Strand: c
      • AT1G05136.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1796; Region: intergenic
      • AT1G05140.1 - [+] show detail - Peptidase M50 family protein
        Distance: -1689; Region: intergenic
    Flanking Genome Sequence: 11-2231-1 - 3-prime edge 
    TCTCTGACTC TGTATCTCTA CTTTAAGTCT CTGCCCAAAC CTTATGCATA 
    TATATGGTGT GATACAACTC TTAATAATGA GCATATGTTT CACCAACTTC 
    TTTTTCAATT ATAAGAAAGT AGATGGAAAG CTAAAGATGA CTACNTTATA 
    ATTTGGTAAT TTTCATATTA TATAATAATA GGAGTATTTA TATAATATAT 
    TATTGCTTTT AAGCATGCTT ACGTTTGAAA ATTCATGGTG ACAATCCATA 
    TAAATAAAAA ACCAAAAACA TAGAGATTGA AATTTACAGG TTCACCTGAA 
    CCTGGTCCCC TTTTCGTTTG AGGATTGGAA AAAGCAACCA AGTGCAATTA 
    ATTAGGGCTC CCGTTAAGTA GTTAACTAAT CGGTAACTTT TCTTTTGTTC 
    CGAAATTTTA ATGACCATCT TTTACTGGAT CTGAAAGACA CATGCATATA 
    TCCAAATCGT TAAACTTTAA CATGCTAACT GTCTTGGGTT AGTGATAGGG 
    TGAATTTTTG TATATAACAG TGGATGTTAC AGTTTTCTAA AGAAAATTTA 
    AATACTAATT TGGCATTTCA CGCTTCATTA TTAGTGTGGC TGGTGACAAA 
    TCTGATTAAT TCATAGTAAA ATGAAAATAA TAAAATCATA TAACAAGAAA 
    TTATTGGAAA TGACAACCTA AAAGACAAAT CATTTTCGTT AATTATTAGC 
    CTAAATACAA TCATTTTCCA TTAAGATAAA N

AT1G05136.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05140.1

Model type
Protein coding
Short Description
Peptidase M50 family protein
Computational Description
Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS SERIN PROTEASE (TAIR:AT2G32480.1); Has 10190 Blast hits to 7652 proteins in 2240 species: Archae - 41; Bacteria - 6892; Metazoa - 13; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 3168 (source: NCBI BLink).
Link
InterPro Scan - TAIR