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11-2234-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11384828 [Map]; Strand: w
      • AT1G31772.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 5414; Region: intergenic
      • AT1G31780.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR01...
        Distance: -6399; Region: intergenic
    Flanking Genome Sequence: 11-2234-1 - 3-prime edge 
    ATNGATACAN TATTAAATAT TAAGACTAAC AATATTTCTT ATAACCTTGT 
    TCACTGTGAT TATTGACTAT ACGTGTGTAT AATCTACTGT ACATTTGTTT 
    TCAACTATAA ATGTTGCGGT GCAATACTGC AATGGACTAG AACAGGAATT 
    TTTTTTGAAA ATATCAGAAT TAGATTAAGT GGAGAAACTA CGTACTTAAT 
    ACTTGCTTTT GCTTTTTATA GTAATTAGAT AAACAAGTTT TAGTAGAATC 
    AAATTTGAAT TAGTGGCNTG GGTCACATCT ACCCCTTGTT TGAACAATAT 
    TAAGTTCTTA AATCAATTAT TAATTAATTA ATTTGAACGT AATCAGGACC 
    TGACATGAGA ACAAGTACCC CCCACTGGAG TGTCAGAGTG CGCAACACGT 
    GTCAAATTCT GAACTAATAT TCAAACTCAC TAAATGACAT TTTNTCCACC 
    ACTACGACAT ATATCGACGA CTATCATCAT TNTNCATNAC TTANTTAGGT 
    AATTACTGGN NTATAATTAA TAATCAATTT TNTTTTTTNN TNAAGGGGNN 
    ATTNNCNNNC NAANANGANA AAANAANTTT NCCAGCAGNG AGCANNTTTT 
    GGAANNATTN TTCCCNNAAN TAAATTTTTN NAANNNCNNC TNCCATTCCG 
    ANNTGANNAA AACNNNNGTN GGGAGGNNAG CGNACNGCTN TCANGCNANA 
    GNNTGGGGAA ACCCTTNTCG NAGGGGTTNC ATNNNNNNNN CGGG

AT1G31772.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G31780.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR