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11-2235-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6914058 [Map]; Strand: c
      • AT3G19880.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -1454; Region: intergenic
      • AT3G19890.1 - [+] show detail - F-box family protein
        Distance: 852; Region: intergenic
    Flanking Genome Sequence: 11-2235-1 - 3-prime edge 
    CTANGANATA GCTGGGNCAN NNTATTCTTA ANGCTANCAG CCCNGGNCTG 
    CCGACCAGGN AGNCCCTATN TNANCTNAAC GGTGAATNCT CTTTCTATAT 
    GTCTCCNAAN GCATTCCACN TAANCNAGTA NATANANNGN GTNCTNGCGN 
    CNNAGTGATA NCAATGTTGA CNANAAACAT CTTCTTGTAA NTCANCACNT 
    GCNGGCCGAA AANCANACGN GCCNAATNCA TCCTCGGCGG GGGCTCTCTT 
    CGAATACATT AGATATGGAG ATGATCAAGA GGTTCTGATA TGACGAAAAT 
    CAGAGGGAAA ATGAGAAAAA TAAAGAGTAT TGCAAAAATG GAAGTTGGNG 
    AAGGATC

AT3G19880.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G05080.1); Has 1001 Blast hits to 942 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1001; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G19890.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G32140.1); Has 1038 Blast hits to 987 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1038; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR